Gene : Cagra.8641s0003 C. grandiflora v1.1
Defline:  (1 of 11) PF05212 - Protein of unknown function (DUF707) (DUF707) Genomic Order:  3
Name:  ? Cagra.8641s0003 Secondary Identifier:  ? PAC:28896331
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8641s0003 0.5kb upstream 0.5kb upstream 4572 true Scaffold8641: 2461-7032 Capsella grandiflora
Cagra.8641s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold8641: 6533-7032 Capsella grandiflora
Cagra.8641s0003 0.5kb downstream 0.5kb downstream 4572 true Scaffold8641: 1961-6532 Capsella grandiflora
Cagra.8641s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold8641: 1961-2460 Capsella grandiflora
Cagra.8641s0003 1.0kb upstream 1.0kb upstream 5072 true Scaffold8641: 2461-7532 Capsella grandiflora
Cagra.8641s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold8641: 6533-7532 Capsella grandiflora
Cagra.8641s0003 1.0kb downstream 1.0kb downstream 5072 true Scaffold8641: 1461-6532 Capsella grandiflora
Cagra.8641s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold8641: 1461-2460 Capsella grandiflora
Cagra.8641s0003 2.0kb upstream 2.0kb upstream 6072 true Scaffold8641: 2461-8532 Capsella grandiflora
Cagra.8641s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold8641: 6533-8532 Capsella grandiflora
Cagra.8641s0003 2.0kb downstream 2.0kb downstream 6072 true Scaffold8641: 461-6532 Capsella grandiflora
Cagra.8641s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold8641: 461-2460 Capsella grandiflora
Cagra.8641s0003 5.0kb upstream 5.0kb upstream 9072 true Scaffold8641: 2461-11532 Capsella grandiflora
Cagra.8641s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold8641: 6533-11532 Capsella grandiflora
Cagra.8641s0003 5.0kb downstream 5.0kb downstream 6532 true Scaffold8641: 1-6532 Capsella grandiflora
Cagra.8641s0003 5.0kb downstream 5.0kb downstream 2460 false Scaffold8641: 1-2460 Capsella grandiflora
Cagra.8641s0003 10.0kb upstream 10.0kb upstream 14072 true Scaffold8641: 2461-16532 Capsella grandiflora
Cagra.8641s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold8641: 6533-16532 Capsella grandiflora
Cagra.8641s0003 10.0kb downstream 10.0kb downstream 6532 true Scaffold8641: 1-6532 Capsella grandiflora
Cagra.8641s0003 10.0kb downstream 10.0kb downstream 2460 false Scaffold8641: 1-2460 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379018 5261 Brassicaceae View MSA
123839660 5264 Brassicales-Malvales View MSA
124347021 5266 SBM View MSA
124247841 5268 Malvidae View MSA
124068224 5270 Rosid View MSA
123742371 5271 Pentapetalae View MSA
122797381 5272 Eudicot View MSA
122046740 5273 Angiosperm View MSA
121347735 5274 Embryophyte View MSA
123426523 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain