Gene : Cagra.4962s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11387:SF17 - CYTOCHROME C OXIDASE SUBUNIT 6B-LIKE-RELATED Genomic Order:  2
Name:  ? Cagra.4962s0002 Secondary Identifier:  ? PAC:28897891
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-3781 Capsella grandiflora pathologic  
Cgrandiflora PWY-7279 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4962s0002 0.5kb upstream 0.5kb upstream 1140 true Scaffold4962: 17822-18961 Capsella grandiflora
Cagra.4962s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold4962: 17822-18321 Capsella grandiflora
Cagra.4962s0002 0.5kb downstream 0.5kb downstream 1140 true Scaffold4962: 18322-19461 Capsella grandiflora
Cagra.4962s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold4962: 18962-19461 Capsella grandiflora
Cagra.4962s0002 1.0kb upstream 1.0kb upstream 1640 true Scaffold4962: 17322-18961 Capsella grandiflora
Cagra.4962s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold4962: 17322-18321 Capsella grandiflora
Cagra.4962s0002 1.0kb downstream 1.0kb downstream 1640 true Scaffold4962: 18322-19961 Capsella grandiflora
Cagra.4962s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold4962: 18962-19961 Capsella grandiflora
Cagra.4962s0002 2.0kb upstream 2.0kb upstream 2640 true Scaffold4962: 16322-18961 Capsella grandiflora
Cagra.4962s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold4962: 16322-18321 Capsella grandiflora
Cagra.4962s0002 2.0kb downstream 2.0kb downstream 2640 true Scaffold4962: 18322-20961 Capsella grandiflora
Cagra.4962s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold4962: 18962-20961 Capsella grandiflora
Cagra.4962s0002 5.0kb upstream 5.0kb upstream 5640 true Scaffold4962: 13322-18961 Capsella grandiflora
Cagra.4962s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold4962: 13322-18321 Capsella grandiflora
Cagra.4962s0002 5.0kb downstream 5.0kb downstream 5640 true Scaffold4962: 18322-23961 Capsella grandiflora
Cagra.4962s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold4962: 18962-23961 Capsella grandiflora
Cagra.4962s0002 10.0kb upstream 10.0kb upstream 10640 true Scaffold4962: 8322-18961 Capsella grandiflora
Cagra.4962s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold4962: 8322-18321 Capsella grandiflora
Cagra.4962s0002 10.0kb downstream 10.0kb downstream 10640 true Scaffold4962: 18322-28961 Capsella grandiflora
Cagra.4962s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold4962: 18962-28961 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379506 5261 Brassicaceae View MSA
123835927 5264 Brassicales-Malvales View MSA
124322107 5266 SBM View MSA
124251643 5268 Malvidae View MSA
124072730 5270 Rosid View MSA
123743678 5271 Pentapetalae View MSA
122770737 5272 Eudicot View MSA
122050829 5273 Angiosperm View MSA
121351047 5274 Embryophyte View MSA
123424784 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain