Gene : Cagra.4894s0017 C. grandiflora v1.1
Defline:  (1 of 11) PTHR11802:SF29 - SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED Genomic Order:  17
Name:  ? Cagra.4894s0017 Secondary Identifier:  ? PAC:28894912
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-3301 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4894s0017 0.5kb upstream 0.5kb upstream 2845 true Scaffold4894: 80987-83831 Capsella grandiflora
Cagra.4894s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold4894: 80987-81486 Capsella grandiflora
Cagra.4894s0017 0.5kb downstream 0.5kb downstream 2845 true Scaffold4894: 81487-84331 Capsella grandiflora
Cagra.4894s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold4894: 83832-84331 Capsella grandiflora
Cagra.4894s0017 1.0kb upstream 1.0kb upstream 3345 true Scaffold4894: 80487-83831 Capsella grandiflora
Cagra.4894s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold4894: 80487-81486 Capsella grandiflora
Cagra.4894s0017 1.0kb downstream 1.0kb downstream 3345 true Scaffold4894: 81487-84831 Capsella grandiflora
Cagra.4894s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold4894: 83832-84831 Capsella grandiflora
Cagra.4894s0017 2.0kb upstream 2.0kb upstream 4345 true Scaffold4894: 79487-83831 Capsella grandiflora
Cagra.4894s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold4894: 79487-81486 Capsella grandiflora
Cagra.4894s0017 2.0kb downstream 2.0kb downstream 4345 true Scaffold4894: 81487-85831 Capsella grandiflora
Cagra.4894s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold4894: 83832-85831 Capsella grandiflora
Cagra.4894s0017 5.0kb upstream 5.0kb upstream 7345 true Scaffold4894: 76487-83831 Capsella grandiflora
Cagra.4894s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold4894: 76487-81486 Capsella grandiflora
Cagra.4894s0017 5.0kb downstream 5.0kb downstream 7345 true Scaffold4894: 81487-88831 Capsella grandiflora
Cagra.4894s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold4894: 83832-88831 Capsella grandiflora
Cagra.4894s0017 10.0kb upstream 10.0kb upstream 12345 true Scaffold4894: 71487-83831 Capsella grandiflora
Cagra.4894s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold4894: 71487-81486 Capsella grandiflora
Cagra.4894s0017 10.0kb downstream 10.0kb downstream 12345 true Scaffold4894: 81487-93831 Capsella grandiflora
Cagra.4894s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold4894: 83832-93831 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378201 5261 Brassicaceae View MSA
123841552 5264 Brassicales-Malvales View MSA
124347801 5266 SBM View MSA
124254219 5268 Malvidae View MSA
124073941 5270 Rosid View MSA
123747460 5271 Pentapetalae View MSA
122796815 5272 Eudicot View MSA
122050629 5273 Angiosperm View MSA
121312037 5274 Embryophyte View MSA
123349249 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain