Gene : Cagra.5647s0041 C. grandiflora v1.1
Defline:  (1 of 8) PTHR27006:SF8 - LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE Genomic Order:  41
Name:  ? Cagra.5647s0041 Secondary Identifier:  ? PAC:28905025
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5647s0041 0.5kb upstream 0.5kb upstream 9543 true Scaffold5647: 175885-185427 Capsella grandiflora
Cagra.5647s0041 0.5kb upstream 0.5kb upstream 500 false Scaffold5647: 175885-176384 Capsella grandiflora
Cagra.5647s0041 0.5kb downstream 0.5kb downstream 9543 true Scaffold5647: 176385-185927 Capsella grandiflora
Cagra.5647s0041 0.5kb downstream 0.5kb downstream 500 false Scaffold5647: 185428-185927 Capsella grandiflora
Cagra.5647s0041 1.0kb upstream 1.0kb upstream 10043 true Scaffold5647: 175385-185427 Capsella grandiflora
Cagra.5647s0041 1.0kb upstream 1.0kb upstream 1000 false Scaffold5647: 175385-176384 Capsella grandiflora
Cagra.5647s0041 1.0kb downstream 1.0kb downstream 10043 true Scaffold5647: 176385-186427 Capsella grandiflora
Cagra.5647s0041 1.0kb downstream 1.0kb downstream 1000 false Scaffold5647: 185428-186427 Capsella grandiflora
Cagra.5647s0041 2.0kb upstream 2.0kb upstream 11043 true Scaffold5647: 174385-185427 Capsella grandiflora
Cagra.5647s0041 2.0kb upstream 2.0kb upstream 2000 false Scaffold5647: 174385-176384 Capsella grandiflora
Cagra.5647s0041 2.0kb downstream 2.0kb downstream 11043 true Scaffold5647: 176385-187427 Capsella grandiflora
Cagra.5647s0041 2.0kb downstream 2.0kb downstream 2000 false Scaffold5647: 185428-187427 Capsella grandiflora
Cagra.5647s0041 5.0kb upstream 5.0kb upstream 14043 true Scaffold5647: 171385-185427 Capsella grandiflora
Cagra.5647s0041 5.0kb upstream 5.0kb upstream 5000 false Scaffold5647: 171385-176384 Capsella grandiflora
Cagra.5647s0041 5.0kb downstream 5.0kb downstream 14043 true Scaffold5647: 176385-190427 Capsella grandiflora
Cagra.5647s0041 5.0kb downstream 5.0kb downstream 5000 false Scaffold5647: 185428-190427 Capsella grandiflora
Cagra.5647s0041 10.0kb upstream 10.0kb upstream 19043 true Scaffold5647: 166385-185427 Capsella grandiflora
Cagra.5647s0041 10.0kb upstream 10.0kb upstream 10000 false Scaffold5647: 166385-176384 Capsella grandiflora
Cagra.5647s0041 10.0kb downstream 10.0kb downstream 19043 true Scaffold5647: 176385-195427 Capsella grandiflora
Cagra.5647s0041 10.0kb downstream 10.0kb downstream 10000 false Scaffold5647: 185428-195427 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343741 5261 Brassicaceae View MSA
123783850 5264 Brassicales-Malvales View MSA
124282062 5266 SBM View MSA
124252439 5268 Malvidae View MSA
124071299 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain