Gene : Cagra.4082s0020 C. grandiflora v1.1
Defline:  (1 of 1) PTHR15245//PTHR15245:SF25 - SYMPLEKIN-RELATED Genomic Order:  20
Name:  ? Cagra.4082s0020 Secondary Identifier:  ? PAC:28896805
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4082s0020 0.5kb upstream 0.5kb upstream 9185 true Scaffold4082: 80353-89537 Capsella grandiflora
Cagra.4082s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold4082: 89038-89537 Capsella grandiflora
Cagra.4082s0020 0.5kb downstream 0.5kb downstream 9185 true Scaffold4082: 79853-89037 Capsella grandiflora
Cagra.4082s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold4082: 79853-80352 Capsella grandiflora
Cagra.4082s0020 1.0kb upstream 1.0kb upstream 9685 true Scaffold4082: 80353-90037 Capsella grandiflora
Cagra.4082s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold4082: 89038-90037 Capsella grandiflora
Cagra.4082s0020 1.0kb downstream 1.0kb downstream 9685 true Scaffold4082: 79353-89037 Capsella grandiflora
Cagra.4082s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold4082: 79353-80352 Capsella grandiflora
Cagra.4082s0020 2.0kb upstream 2.0kb upstream 10685 true Scaffold4082: 80353-91037 Capsella grandiflora
Cagra.4082s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold4082: 89038-91037 Capsella grandiflora
Cagra.4082s0020 2.0kb downstream 2.0kb downstream 10685 true Scaffold4082: 78353-89037 Capsella grandiflora
Cagra.4082s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold4082: 78353-80352 Capsella grandiflora
Cagra.4082s0020 5.0kb upstream 5.0kb upstream 13685 true Scaffold4082: 80353-94037 Capsella grandiflora
Cagra.4082s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold4082: 89038-94037 Capsella grandiflora
Cagra.4082s0020 5.0kb downstream 5.0kb downstream 13685 true Scaffold4082: 75353-89037 Capsella grandiflora
Cagra.4082s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold4082: 75353-80352 Capsella grandiflora
Cagra.4082s0020 10.0kb upstream 10.0kb upstream 18685 true Scaffold4082: 80353-99037 Capsella grandiflora
Cagra.4082s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold4082: 89038-99037 Capsella grandiflora
Cagra.4082s0020 10.0kb downstream 10.0kb downstream 18685 true Scaffold4082: 70353-89037 Capsella grandiflora
Cagra.4082s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold4082: 70353-80352 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374210 5261 Brassicaceae View MSA
123830783 5264 Brassicales-Malvales View MSA
124343090 5266 SBM View MSA
124246771 5268 Malvidae View MSA
124064902 5270 Rosid View MSA
123745431 5271 Pentapetalae View MSA
122791448 5272 Eudicot View MSA
122046301 5273 Angiosperm View MSA
121344612 5274 Embryophyte View MSA
123424208 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain