Gene : Cagra.3573s0003 C. grandiflora v1.1
Defline:  (1 of 3) PTHR11200:SF128 - TYPE I INOSITOL 1,4,5-TRISPHOSPHATE 5-PHOSPHATASE 1 Genomic Order:  3
Name:  ? Cagra.3573s0003 Secondary Identifier:  ? PAC:28896747
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6358 Capsella grandiflora pathologic  
Cgrandiflora PWY-6363 Capsella grandiflora pathologic  
Cgrandiflora PWY-6364 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3573s0003 0.5kb upstream 0.5kb upstream 3335 true Scaffold3573: 9481-12815 Capsella grandiflora
Cagra.3573s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold3573: 9481-9980 Capsella grandiflora
Cagra.3573s0003 0.5kb downstream 0.5kb downstream 3335 true Scaffold3573: 9981-13315 Capsella grandiflora
Cagra.3573s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold3573: 12816-13315 Capsella grandiflora
Cagra.3573s0003 1.0kb upstream 1.0kb upstream 3835 true Scaffold3573: 8981-12815 Capsella grandiflora
Cagra.3573s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold3573: 8981-9980 Capsella grandiflora
Cagra.3573s0003 1.0kb downstream 1.0kb downstream 3835 true Scaffold3573: 9981-13815 Capsella grandiflora
Cagra.3573s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold3573: 12816-13815 Capsella grandiflora
Cagra.3573s0003 2.0kb upstream 2.0kb upstream 4835 true Scaffold3573: 7981-12815 Capsella grandiflora
Cagra.3573s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold3573: 7981-9980 Capsella grandiflora
Cagra.3573s0003 2.0kb downstream 2.0kb downstream 4835 true Scaffold3573: 9981-14815 Capsella grandiflora
Cagra.3573s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold3573: 12816-14815 Capsella grandiflora
Cagra.3573s0003 5.0kb upstream 5.0kb upstream 7835 true Scaffold3573: 4981-12815 Capsella grandiflora
Cagra.3573s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold3573: 4981-9980 Capsella grandiflora
Cagra.3573s0003 5.0kb downstream 5.0kb downstream 7835 true Scaffold3573: 9981-17815 Capsella grandiflora
Cagra.3573s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold3573: 12816-17815 Capsella grandiflora
Cagra.3573s0003 10.0kb upstream 10.0kb upstream 12815 true Scaffold3573: 1-12815 Capsella grandiflora
Cagra.3573s0003 10.0kb upstream 10.0kb upstream 9980 false Scaffold3573: 1-9980 Capsella grandiflora
Cagra.3573s0003 10.0kb downstream 10.0kb downstream 12835 true Scaffold3573: 9981-22815 Capsella grandiflora
Cagra.3573s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold3573: 12816-22815 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370213 5261 Brassicaceae View MSA
123839810 5264 Brassicales-Malvales View MSA
124339394 5266 SBM View MSA
124241049 5268 Malvidae View MSA
124064481 5270 Rosid View MSA
123740737 5271 Pentapetalae View MSA
122795494 5272 Eudicot View MSA
122042148 5273 Angiosperm View MSA
121350777 5274 Embryophyte View MSA
123427535 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain