Gene : Cagra.3696s0012 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31618:SF3 - MECHANOSENSITIVE ION CHANNEL PROTEIN 10-RELATED Genomic Order:  12
Name:  ? Cagra.3696s0012 Secondary Identifier:  ? PAC:28913591
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3696s0012 0.5kb upstream 0.5kb upstream 3806 true Scaffold3696: 58198-62003 Capsella grandiflora
Cagra.3696s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold3696: 61504-62003 Capsella grandiflora
Cagra.3696s0012 0.5kb downstream 0.5kb downstream 3806 true Scaffold3696: 57698-61503 Capsella grandiflora
Cagra.3696s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold3696: 57698-58197 Capsella grandiflora
Cagra.3696s0012 1.0kb upstream 1.0kb upstream 4306 true Scaffold3696: 58198-62503 Capsella grandiflora
Cagra.3696s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold3696: 61504-62503 Capsella grandiflora
Cagra.3696s0012 1.0kb downstream 1.0kb downstream 4306 true Scaffold3696: 57198-61503 Capsella grandiflora
Cagra.3696s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold3696: 57198-58197 Capsella grandiflora
Cagra.3696s0012 2.0kb upstream 2.0kb upstream 5306 true Scaffold3696: 58198-63503 Capsella grandiflora
Cagra.3696s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold3696: 61504-63503 Capsella grandiflora
Cagra.3696s0012 2.0kb downstream 2.0kb downstream 5306 true Scaffold3696: 56198-61503 Capsella grandiflora
Cagra.3696s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold3696: 56198-58197 Capsella grandiflora
Cagra.3696s0012 5.0kb upstream 5.0kb upstream 8306 true Scaffold3696: 58198-66503 Capsella grandiflora
Cagra.3696s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold3696: 61504-66503 Capsella grandiflora
Cagra.3696s0012 5.0kb downstream 5.0kb downstream 8306 true Scaffold3696: 53198-61503 Capsella grandiflora
Cagra.3696s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold3696: 53198-58197 Capsella grandiflora
Cagra.3696s0012 10.0kb upstream 10.0kb upstream 13306 true Scaffold3696: 58198-71503 Capsella grandiflora
Cagra.3696s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold3696: 61504-71503 Capsella grandiflora
Cagra.3696s0012 10.0kb downstream 10.0kb downstream 13306 true Scaffold3696: 48198-61503 Capsella grandiflora
Cagra.3696s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold3696: 48198-58197 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041489 5273 Angiosperm View MSA
122362114 5261 Brassicaceae View MSA
123827538 5264 Brassicales-Malvales View MSA
124349252 5266 SBM View MSA
124238536 5268 Malvidae View MSA
124069655 5270 Rosid View MSA
123753249 5271 Pentapetalae View MSA
122794299 5272 Eudicot View MSA
121309858 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain