Gene : Cagra.3641s0020 C. grandiflora v1.1
Defline:  (1 of 2) KOG1740 - Predicted mitochondrial/chloroplast ribosomal protein S17 Genomic Order:  20
Name:  ? Cagra.3641s0020 Secondary Identifier:  ? PAC:28906259
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3641s0020 0.5kb upstream 0.5kb upstream 1665 true Scaffold3641: 82794-84458 Capsella grandiflora
Cagra.3641s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold3641: 82794-83293 Capsella grandiflora
Cagra.3641s0020 0.5kb downstream 0.5kb downstream 1665 true Scaffold3641: 83294-84958 Capsella grandiflora
Cagra.3641s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold3641: 84459-84958 Capsella grandiflora
Cagra.3641s0020 1.0kb upstream 1.0kb upstream 2165 true Scaffold3641: 82294-84458 Capsella grandiflora
Cagra.3641s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold3641: 82294-83293 Capsella grandiflora
Cagra.3641s0020 1.0kb downstream 1.0kb downstream 2165 true Scaffold3641: 83294-85458 Capsella grandiflora
Cagra.3641s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold3641: 84459-85458 Capsella grandiflora
Cagra.3641s0020 2.0kb upstream 2.0kb upstream 3165 true Scaffold3641: 81294-84458 Capsella grandiflora
Cagra.3641s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold3641: 81294-83293 Capsella grandiflora
Cagra.3641s0020 2.0kb downstream 2.0kb downstream 3165 true Scaffold3641: 83294-86458 Capsella grandiflora
Cagra.3641s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold3641: 84459-86458 Capsella grandiflora
Cagra.3641s0020 5.0kb upstream 5.0kb upstream 6165 true Scaffold3641: 78294-84458 Capsella grandiflora
Cagra.3641s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold3641: 78294-83293 Capsella grandiflora
Cagra.3641s0020 5.0kb downstream 5.0kb downstream 6165 true Scaffold3641: 83294-89458 Capsella grandiflora
Cagra.3641s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold3641: 84459-89458 Capsella grandiflora
Cagra.3641s0020 10.0kb upstream 10.0kb upstream 11165 true Scaffold3641: 73294-84458 Capsella grandiflora
Cagra.3641s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold3641: 73294-83293 Capsella grandiflora
Cagra.3641s0020 10.0kb downstream 10.0kb downstream 11165 true Scaffold3641: 83294-94458 Capsella grandiflora
Cagra.3641s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold3641: 84459-94458 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376976 5261 Brassicaceae View MSA
123836995 5264 Brassicales-Malvales View MSA
124346769 5266 SBM View MSA
124242135 5268 Malvidae View MSA
124063542 5270 Rosid View MSA
123744369 5271 Pentapetalae View MSA
122786157 5272 Eudicot View MSA
122045320 5273 Angiosperm View MSA
121347348 5274 Embryophyte View MSA
123424165 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain