Gene : Cagra.3166s0050 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22835//PTHR22835:SF219 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN Genomic Order:  50
Name:  ? Cagra.3166s0050 Secondary Identifier:  ? PAC:28899725
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3166s0050 0.5kb upstream 0.5kb upstream 2081 true Scaffold3166: 163719-165799 Capsella grandiflora
Cagra.3166s0050 0.5kb upstream 0.5kb upstream 500 false Scaffold3166: 163719-164218 Capsella grandiflora
Cagra.3166s0050 0.5kb downstream 0.5kb downstream 2081 true Scaffold3166: 164219-166299 Capsella grandiflora
Cagra.3166s0050 0.5kb downstream 0.5kb downstream 500 false Scaffold3166: 165800-166299 Capsella grandiflora
Cagra.3166s0050 1.0kb upstream 1.0kb upstream 2581 true Scaffold3166: 163219-165799 Capsella grandiflora
Cagra.3166s0050 1.0kb upstream 1.0kb upstream 1000 false Scaffold3166: 163219-164218 Capsella grandiflora
Cagra.3166s0050 1.0kb downstream 1.0kb downstream 2581 true Scaffold3166: 164219-166799 Capsella grandiflora
Cagra.3166s0050 1.0kb downstream 1.0kb downstream 1000 false Scaffold3166: 165800-166799 Capsella grandiflora
Cagra.3166s0050 2.0kb upstream 2.0kb upstream 3581 true Scaffold3166: 162219-165799 Capsella grandiflora
Cagra.3166s0050 2.0kb upstream 2.0kb upstream 2000 false Scaffold3166: 162219-164218 Capsella grandiflora
Cagra.3166s0050 2.0kb downstream 2.0kb downstream 3581 true Scaffold3166: 164219-167799 Capsella grandiflora
Cagra.3166s0050 2.0kb downstream 2.0kb downstream 2000 false Scaffold3166: 165800-167799 Capsella grandiflora
Cagra.3166s0050 5.0kb upstream 5.0kb upstream 6581 true Scaffold3166: 159219-165799 Capsella grandiflora
Cagra.3166s0050 5.0kb upstream 5.0kb upstream 5000 false Scaffold3166: 159219-164218 Capsella grandiflora
Cagra.3166s0050 5.0kb downstream 5.0kb downstream 6581 true Scaffold3166: 164219-170799 Capsella grandiflora
Cagra.3166s0050 5.0kb downstream 5.0kb downstream 5000 false Scaffold3166: 165800-170799 Capsella grandiflora
Cagra.3166s0050 10.0kb upstream 10.0kb upstream 11581 true Scaffold3166: 154219-165799 Capsella grandiflora
Cagra.3166s0050 10.0kb upstream 10.0kb upstream 10000 false Scaffold3166: 154219-164218 Capsella grandiflora
Cagra.3166s0050 10.0kb downstream 10.0kb downstream 11581 true Scaffold3166: 164219-175799 Capsella grandiflora
Cagra.3166s0050 10.0kb downstream 10.0kb downstream 10000 false Scaffold3166: 165800-175799 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362673 5261 Brassicaceae View MSA
123834120 5264 Brassicales-Malvales View MSA
124346711 5266 SBM View MSA
124238367 5268 Malvidae View MSA
124060956 5270 Rosid View MSA
123751709 5271 Pentapetalae View MSA
122792759 5272 Eudicot View MSA
122045823 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain