Gene : Cagra.3356s0019 C. grandiflora v1.1
Defline:  (1 of 1) 1.1.1.27 - L-lactate dehydrogenase / L-lactic dehydrogenase Genomic Order:  19
Name:  ? Cagra.3356s0019 Secondary Identifier:  ? PAC:28898186
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora ANAEROFRUCAT-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-5481 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3356s0019 0.5kb upstream 0.5kb upstream 2041 true Scaffold3356: 72804-74844 Capsella grandiflora
Cagra.3356s0019 0.5kb upstream 0.5kb upstream 500 false Scaffold3356: 72804-73303 Capsella grandiflora
Cagra.3356s0019 0.5kb downstream 0.5kb downstream 2041 true Scaffold3356: 73304-75344 Capsella grandiflora
Cagra.3356s0019 0.5kb downstream 0.5kb downstream 500 false Scaffold3356: 74845-75344 Capsella grandiflora
Cagra.3356s0019 1.0kb upstream 1.0kb upstream 2541 true Scaffold3356: 72304-74844 Capsella grandiflora
Cagra.3356s0019 1.0kb upstream 1.0kb upstream 1000 false Scaffold3356: 72304-73303 Capsella grandiflora
Cagra.3356s0019 1.0kb downstream 1.0kb downstream 2541 true Scaffold3356: 73304-75844 Capsella grandiflora
Cagra.3356s0019 1.0kb downstream 1.0kb downstream 1000 false Scaffold3356: 74845-75844 Capsella grandiflora
Cagra.3356s0019 2.0kb upstream 2.0kb upstream 3541 true Scaffold3356: 71304-74844 Capsella grandiflora
Cagra.3356s0019 2.0kb upstream 2.0kb upstream 2000 false Scaffold3356: 71304-73303 Capsella grandiflora
Cagra.3356s0019 2.0kb downstream 2.0kb downstream 3541 true Scaffold3356: 73304-76844 Capsella grandiflora
Cagra.3356s0019 2.0kb downstream 2.0kb downstream 2000 false Scaffold3356: 74845-76844 Capsella grandiflora
Cagra.3356s0019 5.0kb upstream 5.0kb upstream 6541 true Scaffold3356: 68304-74844 Capsella grandiflora
Cagra.3356s0019 5.0kb upstream 5.0kb upstream 5000 false Scaffold3356: 68304-73303 Capsella grandiflora
Cagra.3356s0019 5.0kb downstream 5.0kb downstream 6541 true Scaffold3356: 73304-79844 Capsella grandiflora
Cagra.3356s0019 5.0kb downstream 5.0kb downstream 5000 false Scaffold3356: 74845-79844 Capsella grandiflora
Cagra.3356s0019 10.0kb upstream 10.0kb upstream 11541 true Scaffold3356: 63304-74844 Capsella grandiflora
Cagra.3356s0019 10.0kb upstream 10.0kb upstream 10000 false Scaffold3356: 63304-73303 Capsella grandiflora
Cagra.3356s0019 10.0kb downstream 10.0kb downstream 11541 true Scaffold3356: 73304-84844 Capsella grandiflora
Cagra.3356s0019 10.0kb downstream 10.0kb downstream 10000 false Scaffold3356: 74845-84844 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380281 5261 Brassicaceae View MSA
123834652 5264 Brassicales-Malvales View MSA
124340660 5266 SBM View MSA
124253081 5268 Malvidae View MSA
124064441 5270 Rosid View MSA
123739146 5271 Pentapetalae View MSA
122785845 5272 Eudicot View MSA
122045770 5273 Angiosperm View MSA
121350532 5274 Embryophyte View MSA
123381776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain