Gene : Cagra.3353s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10527:SF3 - FI21453P1 Genomic Order:  2
Name:  ? Cagra.3353s0002 Secondary Identifier:  ? PAC:28911167
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3353s0002 0.5kb upstream 0.5kb upstream 7567 true Scaffold3353: 5441-13007 Capsella grandiflora
Cagra.3353s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold3353: 5441-5940 Capsella grandiflora
Cagra.3353s0002 0.5kb downstream 0.5kb downstream 7567 true Scaffold3353: 5941-13507 Capsella grandiflora
Cagra.3353s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold3353: 13008-13507 Capsella grandiflora
Cagra.3353s0002 1.0kb upstream 1.0kb upstream 8067 true Scaffold3353: 4941-13007 Capsella grandiflora
Cagra.3353s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold3353: 4941-5940 Capsella grandiflora
Cagra.3353s0002 1.0kb downstream 1.0kb downstream 7594 true Scaffold3353: 5941-13534 Capsella grandiflora
Cagra.3353s0002 1.0kb downstream 1.0kb downstream 527 false Scaffold3353: 13008-13534 Capsella grandiflora
Cagra.3353s0002 2.0kb upstream 2.0kb upstream 9067 true Scaffold3353: 3941-13007 Capsella grandiflora
Cagra.3353s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold3353: 3941-5940 Capsella grandiflora
Cagra.3353s0002 2.0kb downstream 2.0kb downstream 7594 true Scaffold3353: 5941-13534 Capsella grandiflora
Cagra.3353s0002 2.0kb downstream 2.0kb downstream 527 false Scaffold3353: 13008-13534 Capsella grandiflora
Cagra.3353s0002 5.0kb upstream 5.0kb upstream 12067 true Scaffold3353: 941-13007 Capsella grandiflora
Cagra.3353s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold3353: 941-5940 Capsella grandiflora
Cagra.3353s0002 5.0kb downstream 5.0kb downstream 7594 true Scaffold3353: 5941-13534 Capsella grandiflora
Cagra.3353s0002 5.0kb downstream 5.0kb downstream 527 false Scaffold3353: 13008-13534 Capsella grandiflora
Cagra.3353s0002 10.0kb upstream 10.0kb upstream 13007 true Scaffold3353: 1-13007 Capsella grandiflora
Cagra.3353s0002 10.0kb upstream 10.0kb upstream 5940 false Scaffold3353: 1-5940 Capsella grandiflora
Cagra.3353s0002 10.0kb downstream 10.0kb downstream 7594 true Scaffold3353: 5941-13534 Capsella grandiflora
Cagra.3353s0002 10.0kb downstream 10.0kb downstream 527 false Scaffold3353: 13008-13534 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026329 5273 Angiosperm View MSA
122376283 5261 Brassicaceae View MSA
123829737 5264 Brassicales-Malvales View MSA
124344998 5266 SBM View MSA
124237948 5268 Malvidae View MSA
124064274 5270 Rosid View MSA
123739927 5271 Pentapetalae View MSA
122787120 5272 Eudicot View MSA
121344720 5274 Embryophyte View MSA
123426345 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain