Gene : Cagra.2625s0010 C. grandiflora v1.1
Defline:  (1 of 1) PTHR24322:SF619 - 3-OXOACYL-[ACYL-CARRIER-PROTEIN] REDUCTASE, CHLOROPLASTIC Genomic Order:  10
Name:  ? Cagra.2625s0010 Secondary Identifier:  ? PAC:28897196
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora FASYN-ELONG-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-5156 Capsella grandiflora pathologic  
Cgrandiflora PWY-5971 Capsella grandiflora pathologic  
Cgrandiflora PWY-5973 Capsella grandiflora pathologic  
Cgrandiflora PWY-5989 Capsella grandiflora pathologic  
Cgrandiflora PWY-6282 Capsella grandiflora pathologic  
Cgrandiflora PWY-7388 Capsella grandiflora pathologic  
Cgrandiflora PWY-7663 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2625s0010 0.5kb upstream 0.5kb upstream 3205 true Scaffold2625: 34660-37864 Capsella grandiflora
Cagra.2625s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold2625: 34660-35159 Capsella grandiflora
Cagra.2625s0010 0.5kb downstream 0.5kb downstream 3205 true Scaffold2625: 35160-38364 Capsella grandiflora
Cagra.2625s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold2625: 37865-38364 Capsella grandiflora
Cagra.2625s0010 1.0kb upstream 1.0kb upstream 3705 true Scaffold2625: 34160-37864 Capsella grandiflora
Cagra.2625s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold2625: 34160-35159 Capsella grandiflora
Cagra.2625s0010 1.0kb downstream 1.0kb downstream 3705 true Scaffold2625: 35160-38864 Capsella grandiflora
Cagra.2625s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold2625: 37865-38864 Capsella grandiflora
Cagra.2625s0010 2.0kb upstream 2.0kb upstream 4705 true Scaffold2625: 33160-37864 Capsella grandiflora
Cagra.2625s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold2625: 33160-35159 Capsella grandiflora
Cagra.2625s0010 2.0kb downstream 2.0kb downstream 4705 true Scaffold2625: 35160-39864 Capsella grandiflora
Cagra.2625s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold2625: 37865-39864 Capsella grandiflora
Cagra.2625s0010 5.0kb upstream 5.0kb upstream 7705 true Scaffold2625: 30160-37864 Capsella grandiflora
Cagra.2625s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold2625: 30160-35159 Capsella grandiflora
Cagra.2625s0010 5.0kb downstream 5.0kb downstream 7705 true Scaffold2625: 35160-42864 Capsella grandiflora
Cagra.2625s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold2625: 37865-42864 Capsella grandiflora
Cagra.2625s0010 10.0kb upstream 10.0kb upstream 12705 true Scaffold2625: 25160-37864 Capsella grandiflora
Cagra.2625s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold2625: 25160-35159 Capsella grandiflora
Cagra.2625s0010 10.0kb downstream 10.0kb downstream 12705 true Scaffold2625: 35160-47864 Capsella grandiflora
Cagra.2625s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold2625: 37865-47864 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371624 5261 Brassicaceae View MSA
123829901 5264 Brassicales-Malvales View MSA
124338010 5266 SBM View MSA
124239071 5268 Malvidae View MSA
124071251 5270 Rosid View MSA
123740776 5271 Pentapetalae View MSA
122787296 5272 Eudicot View MSA
122042809 5273 Angiosperm View MSA
121347149 5274 Embryophyte View MSA
123428494 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain