Gene : Cagra.2516s0013 C. grandiflora v1.1
Defline:  (1 of 5) PTHR10943 - 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT Genomic Order:  13
Name:  ? Cagra.2516s0013 Secondary Identifier:  ? PAC:28900732
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2516s0013 0.5kb upstream 0.5kb upstream 6665 true Scaffold2516: 41842-48506 Capsella grandiflora
Cagra.2516s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold2516: 48007-48506 Capsella grandiflora
Cagra.2516s0013 0.5kb downstream 0.5kb downstream 6665 true Scaffold2516: 41342-48006 Capsella grandiflora
Cagra.2516s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold2516: 41342-41841 Capsella grandiflora
Cagra.2516s0013 1.0kb upstream 1.0kb upstream 7165 true Scaffold2516: 41842-49006 Capsella grandiflora
Cagra.2516s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold2516: 48007-49006 Capsella grandiflora
Cagra.2516s0013 1.0kb downstream 1.0kb downstream 7165 true Scaffold2516: 40842-48006 Capsella grandiflora
Cagra.2516s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold2516: 40842-41841 Capsella grandiflora
Cagra.2516s0013 2.0kb upstream 2.0kb upstream 8165 true Scaffold2516: 41842-50006 Capsella grandiflora
Cagra.2516s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold2516: 48007-50006 Capsella grandiflora
Cagra.2516s0013 2.0kb downstream 2.0kb downstream 8165 true Scaffold2516: 39842-48006 Capsella grandiflora
Cagra.2516s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold2516: 39842-41841 Capsella grandiflora
Cagra.2516s0013 5.0kb upstream 5.0kb upstream 11165 true Scaffold2516: 41842-53006 Capsella grandiflora
Cagra.2516s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold2516: 48007-53006 Capsella grandiflora
Cagra.2516s0013 5.0kb downstream 5.0kb downstream 11165 true Scaffold2516: 36842-48006 Capsella grandiflora
Cagra.2516s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold2516: 36842-41841 Capsella grandiflora
Cagra.2516s0013 10.0kb upstream 10.0kb upstream 16165 true Scaffold2516: 41842-58006 Capsella grandiflora
Cagra.2516s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold2516: 48007-58006 Capsella grandiflora
Cagra.2516s0013 10.0kb downstream 10.0kb downstream 16165 true Scaffold2516: 31842-48006 Capsella grandiflora
Cagra.2516s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold2516: 31842-41841 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379635 5261 Brassicaceae View MSA
123827603 5264 Brassicales-Malvales View MSA
124341714 5266 SBM View MSA
124239194 5268 Malvidae View MSA
124062825 5270 Rosid View MSA
123743224 5271 Pentapetalae View MSA
122786983 5272 Eudicot View MSA
122042231 5273 Angiosperm View MSA
123428994 5275 Viridiplantae View MSA
121346933 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain