Gene : Cagra.2129s0015 C. grandiflora v1.1
Defline:  (1 of 2) PTHR26402:SF569 - TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR5-RELATED Genomic Order:  15
Name:  ? Cagra.2129s0015 Secondary Identifier:  ? PAC:28914974
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2129s0015 0.5kb upstream 0.5kb upstream 3548 true Scaffold2129: 56606-60153 Capsella grandiflora
Cagra.2129s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold2129: 59654-60153 Capsella grandiflora
Cagra.2129s0015 0.5kb downstream 0.5kb downstream 3548 true Scaffold2129: 56106-59653 Capsella grandiflora
Cagra.2129s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold2129: 56106-56605 Capsella grandiflora
Cagra.2129s0015 1.0kb upstream 1.0kb upstream 4048 true Scaffold2129: 56606-60653 Capsella grandiflora
Cagra.2129s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold2129: 59654-60653 Capsella grandiflora
Cagra.2129s0015 1.0kb downstream 1.0kb downstream 4048 true Scaffold2129: 55606-59653 Capsella grandiflora
Cagra.2129s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold2129: 55606-56605 Capsella grandiflora
Cagra.2129s0015 2.0kb upstream 2.0kb upstream 5048 true Scaffold2129: 56606-61653 Capsella grandiflora
Cagra.2129s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold2129: 59654-61653 Capsella grandiflora
Cagra.2129s0015 2.0kb downstream 2.0kb downstream 5048 true Scaffold2129: 54606-59653 Capsella grandiflora
Cagra.2129s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold2129: 54606-56605 Capsella grandiflora
Cagra.2129s0015 5.0kb upstream 5.0kb upstream 6131 true Scaffold2129: 56606-62736 Capsella grandiflora
Cagra.2129s0015 5.0kb upstream 5.0kb upstream 3083 false Scaffold2129: 59654-62736 Capsella grandiflora
Cagra.2129s0015 5.0kb downstream 5.0kb downstream 8048 true Scaffold2129: 51606-59653 Capsella grandiflora
Cagra.2129s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold2129: 51606-56605 Capsella grandiflora
Cagra.2129s0015 10.0kb upstream 10.0kb upstream 6131 true Scaffold2129: 56606-62736 Capsella grandiflora
Cagra.2129s0015 10.0kb upstream 10.0kb upstream 3083 false Scaffold2129: 59654-62736 Capsella grandiflora
Cagra.2129s0015 10.0kb downstream 10.0kb downstream 13048 true Scaffold2129: 46606-59653 Capsella grandiflora
Cagra.2129s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold2129: 46606-56605 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367485 5261 Brassicaceae View MSA
123836777 5264 Brassicales-Malvales View MSA
124350739 5266 SBM View MSA
124251308 5268 Malvidae View MSA
124070705 5270 Rosid View MSA
123743844 5271 Pentapetalae View MSA
122796844 5272 Eudicot View MSA
122049378 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121348343 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain