Gene : Cagra.2235s0006 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31288:SF10 - O-FUCOSYLTRANSFERASE FAMILY PROTEIN Genomic Order:  6
Name:  ? Cagra.2235s0006 Secondary Identifier:  ? PAC:28907712
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2235s0006 0.5kb upstream 0.5kb upstream 4707 true Scaffold2235: 28305-33011 Capsella grandiflora
Cagra.2235s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold2235: 28305-28804 Capsella grandiflora
Cagra.2235s0006 0.5kb downstream 0.5kb downstream 4707 true Scaffold2235: 28805-33511 Capsella grandiflora
Cagra.2235s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold2235: 33012-33511 Capsella grandiflora
Cagra.2235s0006 1.0kb upstream 1.0kb upstream 5207 true Scaffold2235: 27805-33011 Capsella grandiflora
Cagra.2235s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold2235: 27805-28804 Capsella grandiflora
Cagra.2235s0006 1.0kb downstream 1.0kb downstream 5207 true Scaffold2235: 28805-34011 Capsella grandiflora
Cagra.2235s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold2235: 33012-34011 Capsella grandiflora
Cagra.2235s0006 2.0kb upstream 2.0kb upstream 6207 true Scaffold2235: 26805-33011 Capsella grandiflora
Cagra.2235s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold2235: 26805-28804 Capsella grandiflora
Cagra.2235s0006 2.0kb downstream 2.0kb downstream 6207 true Scaffold2235: 28805-35011 Capsella grandiflora
Cagra.2235s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold2235: 33012-35011 Capsella grandiflora
Cagra.2235s0006 5.0kb upstream 5.0kb upstream 9207 true Scaffold2235: 23805-33011 Capsella grandiflora
Cagra.2235s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold2235: 23805-28804 Capsella grandiflora
Cagra.2235s0006 5.0kb downstream 5.0kb downstream 9207 true Scaffold2235: 28805-38011 Capsella grandiflora
Cagra.2235s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold2235: 33012-38011 Capsella grandiflora
Cagra.2235s0006 10.0kb upstream 10.0kb upstream 14207 true Scaffold2235: 18805-33011 Capsella grandiflora
Cagra.2235s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold2235: 18805-28804 Capsella grandiflora
Cagra.2235s0006 10.0kb downstream 10.0kb downstream 14207 true Scaffold2235: 28805-43011 Capsella grandiflora
Cagra.2235s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold2235: 33012-43011 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360552 5261 Brassicaceae View MSA
123828485 5264 Brassicales-Malvales View MSA
124341033 5266 SBM View MSA
124243953 5268 Malvidae View MSA
124060500 5270 Rosid View MSA
123747163 5271 Pentapetalae View MSA
122792836 5272 Eudicot View MSA
122049043 5273 Angiosperm View MSA
121350894 5274 Embryophyte View MSA
123381927 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain