Gene : Cagra.2306s0008 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11216:SF72 - CALCIUM-BINDING EF HAND-CONTAINING PROTEIN Genomic Order:  8
Name:  ? Cagra.2306s0008 Secondary Identifier:  ? PAC:28914840
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2306s0008 0.5kb upstream 0.5kb upstream 7321 true Scaffold2306: 32546-39866 Capsella grandiflora
Cagra.2306s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold2306: 32546-33045 Capsella grandiflora
Cagra.2306s0008 0.5kb downstream 0.5kb downstream 7321 true Scaffold2306: 33046-40366 Capsella grandiflora
Cagra.2306s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold2306: 39867-40366 Capsella grandiflora
Cagra.2306s0008 1.0kb upstream 1.0kb upstream 7821 true Scaffold2306: 32046-39866 Capsella grandiflora
Cagra.2306s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold2306: 32046-33045 Capsella grandiflora
Cagra.2306s0008 1.0kb downstream 1.0kb downstream 7821 true Scaffold2306: 33046-40866 Capsella grandiflora
Cagra.2306s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold2306: 39867-40866 Capsella grandiflora
Cagra.2306s0008 2.0kb upstream 2.0kb upstream 8821 true Scaffold2306: 31046-39866 Capsella grandiflora
Cagra.2306s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold2306: 31046-33045 Capsella grandiflora
Cagra.2306s0008 2.0kb downstream 2.0kb downstream 8821 true Scaffold2306: 33046-41866 Capsella grandiflora
Cagra.2306s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold2306: 39867-41866 Capsella grandiflora
Cagra.2306s0008 5.0kb upstream 5.0kb upstream 11821 true Scaffold2306: 28046-39866 Capsella grandiflora
Cagra.2306s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold2306: 28046-33045 Capsella grandiflora
Cagra.2306s0008 5.0kb downstream 5.0kb downstream 11821 true Scaffold2306: 33046-44866 Capsella grandiflora
Cagra.2306s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold2306: 39867-44866 Capsella grandiflora
Cagra.2306s0008 10.0kb upstream 10.0kb upstream 16821 true Scaffold2306: 23046-39866 Capsella grandiflora
Cagra.2306s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold2306: 23046-33045 Capsella grandiflora
Cagra.2306s0008 10.0kb downstream 10.0kb downstream 16821 true Scaffold2306: 33046-49866 Capsella grandiflora
Cagra.2306s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold2306: 39867-49866 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375756 5261 Brassicaceae View MSA
123840175 5264 Brassicales-Malvales View MSA
124339695 5266 SBM View MSA
124251840 5268 Malvidae View MSA
124067152 5270 Rosid View MSA
123746825 5271 Pentapetalae View MSA
122791981 5272 Eudicot View MSA
122047031 5273 Angiosperm View MSA
121346987 5274 Embryophyte View MSA
123426341 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain