Gene : Cagra.1670s0030 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12000:SF3 - LEGUMAIN Genomic Order:  30
Name:  ? Cagra.1670s0030 Secondary Identifier:  ? PAC:28894688
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1670s0030 0.5kb upstream 0.5kb upstream 3297 true Scaffold1670: 109288-112584 Capsella grandiflora
Cagra.1670s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold1670: 109288-109787 Capsella grandiflora
Cagra.1670s0030 0.5kb downstream 0.5kb downstream 3297 true Scaffold1670: 109788-113084 Capsella grandiflora
Cagra.1670s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold1670: 112585-113084 Capsella grandiflora
Cagra.1670s0030 1.0kb upstream 1.0kb upstream 3797 true Scaffold1670: 108788-112584 Capsella grandiflora
Cagra.1670s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold1670: 108788-109787 Capsella grandiflora
Cagra.1670s0030 1.0kb downstream 1.0kb downstream 3797 true Scaffold1670: 109788-113584 Capsella grandiflora
Cagra.1670s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold1670: 112585-113584 Capsella grandiflora
Cagra.1670s0030 2.0kb upstream 2.0kb upstream 4797 true Scaffold1670: 107788-112584 Capsella grandiflora
Cagra.1670s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold1670: 107788-109787 Capsella grandiflora
Cagra.1670s0030 2.0kb downstream 2.0kb downstream 4797 true Scaffold1670: 109788-114584 Capsella grandiflora
Cagra.1670s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold1670: 112585-114584 Capsella grandiflora
Cagra.1670s0030 5.0kb upstream 5.0kb upstream 7797 true Scaffold1670: 104788-112584 Capsella grandiflora
Cagra.1670s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold1670: 104788-109787 Capsella grandiflora
Cagra.1670s0030 5.0kb downstream 5.0kb downstream 7797 true Scaffold1670: 109788-117584 Capsella grandiflora
Cagra.1670s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold1670: 112585-117584 Capsella grandiflora
Cagra.1670s0030 10.0kb upstream 10.0kb upstream 12797 true Scaffold1670: 99788-112584 Capsella grandiflora
Cagra.1670s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold1670: 99788-109787 Capsella grandiflora
Cagra.1670s0030 10.0kb downstream 10.0kb downstream 12797 true Scaffold1670: 109788-122584 Capsella grandiflora
Cagra.1670s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold1670: 112585-122584 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370053 5261 Brassicaceae View MSA
123836069 5264 Brassicales-Malvales View MSA
124338934 5266 SBM View MSA
124241831 5268 Malvidae View MSA
124050213 5270 Rosid View MSA
123750585 5271 Pentapetalae View MSA
122797224 5272 Eudicot View MSA
122048479 5273 Angiosperm View MSA
121350664 5274 Embryophyte View MSA
123428632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain