Gene : Cagra.1725s0083 C. grandiflora v1.1
Defline:  (1 of 9) PF13516 - Leucine Rich repeat (LRR_6) Genomic Order:  83
Name:  ? Cagra.1725s0083 Secondary Identifier:  ? PAC:28896059
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1725s0083 0.5kb upstream 0.5kb upstream 2593 true Scaffold1725: 313226-315818 Capsella grandiflora
Cagra.1725s0083 0.5kb upstream 0.5kb upstream 500 false Scaffold1725: 315319-315818 Capsella grandiflora
Cagra.1725s0083 0.5kb downstream 0.5kb downstream 2593 true Scaffold1725: 312726-315318 Capsella grandiflora
Cagra.1725s0083 0.5kb downstream 0.5kb downstream 500 false Scaffold1725: 312726-313225 Capsella grandiflora
Cagra.1725s0083 1.0kb upstream 1.0kb upstream 3093 true Scaffold1725: 313226-316318 Capsella grandiflora
Cagra.1725s0083 1.0kb upstream 1.0kb upstream 1000 false Scaffold1725: 315319-316318 Capsella grandiflora
Cagra.1725s0083 1.0kb downstream 1.0kb downstream 3093 true Scaffold1725: 312226-315318 Capsella grandiflora
Cagra.1725s0083 1.0kb downstream 1.0kb downstream 1000 false Scaffold1725: 312226-313225 Capsella grandiflora
Cagra.1725s0083 2.0kb upstream 2.0kb upstream 4093 true Scaffold1725: 313226-317318 Capsella grandiflora
Cagra.1725s0083 2.0kb upstream 2.0kb upstream 2000 false Scaffold1725: 315319-317318 Capsella grandiflora
Cagra.1725s0083 2.0kb downstream 2.0kb downstream 4093 true Scaffold1725: 311226-315318 Capsella grandiflora
Cagra.1725s0083 2.0kb downstream 2.0kb downstream 2000 false Scaffold1725: 311226-313225 Capsella grandiflora
Cagra.1725s0083 5.0kb upstream 5.0kb upstream 7093 true Scaffold1725: 313226-320318 Capsella grandiflora
Cagra.1725s0083 5.0kb upstream 5.0kb upstream 5000 false Scaffold1725: 315319-320318 Capsella grandiflora
Cagra.1725s0083 5.0kb downstream 5.0kb downstream 7093 true Scaffold1725: 308226-315318 Capsella grandiflora
Cagra.1725s0083 5.0kb downstream 5.0kb downstream 5000 false Scaffold1725: 308226-313225 Capsella grandiflora
Cagra.1725s0083 10.0kb upstream 10.0kb upstream 12093 true Scaffold1725: 313226-325318 Capsella grandiflora
Cagra.1725s0083 10.0kb upstream 10.0kb upstream 10000 false Scaffold1725: 315319-325318 Capsella grandiflora
Cagra.1725s0083 10.0kb downstream 10.0kb downstream 12093 true Scaffold1725: 303226-315318 Capsella grandiflora
Cagra.1725s0083 10.0kb downstream 10.0kb downstream 10000 false Scaffold1725: 303226-313225 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363662 5261 Brassicaceae View MSA
123832633 5264 Brassicales-Malvales View MSA
124341951 5266 SBM View MSA
124238643 5268 Malvidae View MSA
124064458 5270 Rosid View MSA
123737042 5271 Pentapetalae View MSA
122791043 5272 Eudicot View MSA
122044000 5273 Angiosperm View MSA
121347064 5274 Embryophyte View MSA
123380487 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain