Gene : Cagra.1629s0063 C. grandiflora v1.1
Defline:  (1 of 4) PTHR24012:SF333 - POLYADENYLATE-BINDING PROTEIN RBP45B-RELATED Genomic Order:  63
Name:  ? Cagra.1629s0063 Secondary Identifier:  ? PAC:28912703
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1629s0063 0.5kb upstream 0.5kb upstream 3497 true Scaffold1629: 295874-299370 Capsella grandiflora
Cagra.1629s0063 0.5kb upstream 0.5kb upstream 500 false Scaffold1629: 295874-296373 Capsella grandiflora
Cagra.1629s0063 0.5kb downstream 0.5kb downstream 3497 true Scaffold1629: 296374-299870 Capsella grandiflora
Cagra.1629s0063 0.5kb downstream 0.5kb downstream 500 false Scaffold1629: 299371-299870 Capsella grandiflora
Cagra.1629s0063 1.0kb upstream 1.0kb upstream 3997 true Scaffold1629: 295374-299370 Capsella grandiflora
Cagra.1629s0063 1.0kb upstream 1.0kb upstream 1000 false Scaffold1629: 295374-296373 Capsella grandiflora
Cagra.1629s0063 1.0kb downstream 1.0kb downstream 3997 true Scaffold1629: 296374-300370 Capsella grandiflora
Cagra.1629s0063 1.0kb downstream 1.0kb downstream 1000 false Scaffold1629: 299371-300370 Capsella grandiflora
Cagra.1629s0063 2.0kb upstream 2.0kb upstream 4997 true Scaffold1629: 294374-299370 Capsella grandiflora
Cagra.1629s0063 2.0kb upstream 2.0kb upstream 2000 false Scaffold1629: 294374-296373 Capsella grandiflora
Cagra.1629s0063 2.0kb downstream 2.0kb downstream 4997 true Scaffold1629: 296374-301370 Capsella grandiflora
Cagra.1629s0063 2.0kb downstream 2.0kb downstream 2000 false Scaffold1629: 299371-301370 Capsella grandiflora
Cagra.1629s0063 5.0kb upstream 5.0kb upstream 7997 true Scaffold1629: 291374-299370 Capsella grandiflora
Cagra.1629s0063 5.0kb upstream 5.0kb upstream 5000 false Scaffold1629: 291374-296373 Capsella grandiflora
Cagra.1629s0063 5.0kb downstream 5.0kb downstream 7997 true Scaffold1629: 296374-304370 Capsella grandiflora
Cagra.1629s0063 5.0kb downstream 5.0kb downstream 5000 false Scaffold1629: 299371-304370 Capsella grandiflora
Cagra.1629s0063 10.0kb upstream 10.0kb upstream 12997 true Scaffold1629: 286374-299370 Capsella grandiflora
Cagra.1629s0063 10.0kb upstream 10.0kb upstream 10000 false Scaffold1629: 286374-296373 Capsella grandiflora
Cagra.1629s0063 10.0kb downstream 10.0kb downstream 12997 true Scaffold1629: 296374-309370 Capsella grandiflora
Cagra.1629s0063 10.0kb downstream 10.0kb downstream 10000 false Scaffold1629: 299371-309370 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360834 5261 Brassicaceae View MSA
123798039 5264 Brassicales-Malvales View MSA
124350861 5266 SBM View MSA
124242646 5268 Malvidae View MSA
124066893 5270 Rosid View MSA
123742056 5271 Pentapetalae View MSA
122786744 5272 Eudicot View MSA
122051452 5273 Angiosperm View MSA
121351371 5274 Embryophyte View MSA
123424048 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain