Gene : Cagra.1629s0019 C. grandiflora v1.1
Defline:  (1 of 1) PTHR20854:SF32 - PAP-SPECIFIC PHOSPHATASE HAL2-LIKE Genomic Order:  19
Name:  ? Cagra.1629s0019 Secondary Identifier:  ? PAC:28912650
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1629s0019 0.5kb upstream 0.5kb upstream 2715 true Scaffold1629: 94604-97318 Capsella grandiflora
Cagra.1629s0019 0.5kb upstream 0.5kb upstream 500 false Scaffold1629: 94604-95103 Capsella grandiflora
Cagra.1629s0019 0.5kb downstream 0.5kb downstream 2715 true Scaffold1629: 95104-97818 Capsella grandiflora
Cagra.1629s0019 0.5kb downstream 0.5kb downstream 500 false Scaffold1629: 97319-97818 Capsella grandiflora
Cagra.1629s0019 1.0kb upstream 1.0kb upstream 3215 true Scaffold1629: 94104-97318 Capsella grandiflora
Cagra.1629s0019 1.0kb upstream 1.0kb upstream 1000 false Scaffold1629: 94104-95103 Capsella grandiflora
Cagra.1629s0019 1.0kb downstream 1.0kb downstream 3215 true Scaffold1629: 95104-98318 Capsella grandiflora
Cagra.1629s0019 1.0kb downstream 1.0kb downstream 1000 false Scaffold1629: 97319-98318 Capsella grandiflora
Cagra.1629s0019 2.0kb upstream 2.0kb upstream 4215 true Scaffold1629: 93104-97318 Capsella grandiflora
Cagra.1629s0019 2.0kb upstream 2.0kb upstream 2000 false Scaffold1629: 93104-95103 Capsella grandiflora
Cagra.1629s0019 2.0kb downstream 2.0kb downstream 4215 true Scaffold1629: 95104-99318 Capsella grandiflora
Cagra.1629s0019 2.0kb downstream 2.0kb downstream 2000 false Scaffold1629: 97319-99318 Capsella grandiflora
Cagra.1629s0019 5.0kb upstream 5.0kb upstream 7215 true Scaffold1629: 90104-97318 Capsella grandiflora
Cagra.1629s0019 5.0kb upstream 5.0kb upstream 5000 false Scaffold1629: 90104-95103 Capsella grandiflora
Cagra.1629s0019 5.0kb downstream 5.0kb downstream 7215 true Scaffold1629: 95104-102318 Capsella grandiflora
Cagra.1629s0019 5.0kb downstream 5.0kb downstream 5000 false Scaffold1629: 97319-102318 Capsella grandiflora
Cagra.1629s0019 10.0kb upstream 10.0kb upstream 12215 true Scaffold1629: 85104-97318 Capsella grandiflora
Cagra.1629s0019 10.0kb upstream 10.0kb upstream 10000 false Scaffold1629: 85104-95103 Capsella grandiflora
Cagra.1629s0019 10.0kb downstream 10.0kb downstream 12215 true Scaffold1629: 95104-107318 Capsella grandiflora
Cagra.1629s0019 10.0kb downstream 10.0kb downstream 10000 false Scaffold1629: 97319-107318 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363098 5261 Brassicaceae View MSA
123830599 5264 Brassicales-Malvales View MSA
124341171 5266 SBM View MSA
124242660 5268 Malvidae View MSA
124065242 5270 Rosid View MSA
123741239 5271 Pentapetalae View MSA
122791133 5272 Eudicot View MSA
122046485 5273 Angiosperm View MSA
121348811 5274 Embryophyte View MSA
123426057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain