Gene : Cagra.1642s0025 C. grandiflora v1.1
Defline:  (1 of 5) PTHR11106 - GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED Genomic Order:  25
Name:  ? Cagra.1642s0025 Secondary Identifier:  ? PAC:28898881
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1642s0025 0.5kb upstream 0.5kb upstream 1951 true Scaffold1642: 80142-82092 Capsella grandiflora
Cagra.1642s0025 0.5kb upstream 0.5kb upstream 500 false Scaffold1642: 81593-82092 Capsella grandiflora
Cagra.1642s0025 0.5kb downstream 0.5kb downstream 1951 true Scaffold1642: 79642-81592 Capsella grandiflora
Cagra.1642s0025 0.5kb downstream 0.5kb downstream 500 false Scaffold1642: 79642-80141 Capsella grandiflora
Cagra.1642s0025 1.0kb upstream 1.0kb upstream 2451 true Scaffold1642: 80142-82592 Capsella grandiflora
Cagra.1642s0025 1.0kb upstream 1.0kb upstream 1000 false Scaffold1642: 81593-82592 Capsella grandiflora
Cagra.1642s0025 1.0kb downstream 1.0kb downstream 2451 true Scaffold1642: 79142-81592 Capsella grandiflora
Cagra.1642s0025 1.0kb downstream 1.0kb downstream 1000 false Scaffold1642: 79142-80141 Capsella grandiflora
Cagra.1642s0025 2.0kb upstream 2.0kb upstream 3451 true Scaffold1642: 80142-83592 Capsella grandiflora
Cagra.1642s0025 2.0kb upstream 2.0kb upstream 2000 false Scaffold1642: 81593-83592 Capsella grandiflora
Cagra.1642s0025 2.0kb downstream 2.0kb downstream 3451 true Scaffold1642: 78142-81592 Capsella grandiflora
Cagra.1642s0025 2.0kb downstream 2.0kb downstream 2000 false Scaffold1642: 78142-80141 Capsella grandiflora
Cagra.1642s0025 5.0kb upstream 5.0kb upstream 6451 true Scaffold1642: 80142-86592 Capsella grandiflora
Cagra.1642s0025 5.0kb upstream 5.0kb upstream 5000 false Scaffold1642: 81593-86592 Capsella grandiflora
Cagra.1642s0025 5.0kb downstream 5.0kb downstream 6451 true Scaffold1642: 75142-81592 Capsella grandiflora
Cagra.1642s0025 5.0kb downstream 5.0kb downstream 5000 false Scaffold1642: 75142-80141 Capsella grandiflora
Cagra.1642s0025 10.0kb upstream 10.0kb upstream 11451 true Scaffold1642: 80142-91592 Capsella grandiflora
Cagra.1642s0025 10.0kb upstream 10.0kb upstream 10000 false Scaffold1642: 81593-91592 Capsella grandiflora
Cagra.1642s0025 10.0kb downstream 10.0kb downstream 11451 true Scaffold1642: 70142-81592 Capsella grandiflora
Cagra.1642s0025 10.0kb downstream 10.0kb downstream 10000 false Scaffold1642: 70142-80141 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370519 5261 Brassicaceae View MSA
123799978 5264 Brassicales-Malvales View MSA
124297444 5266 SBM View MSA
124149333 5268 Malvidae View MSA
123875158 5270 Rosid View MSA
123746303 5271 Pentapetalae View MSA
122790136 5272 Eudicot View MSA
122047973 5273 Angiosperm View MSA
121350961 5274 Embryophyte View MSA
123428110 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain