Gene : Cagra.1642s0020 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31811:SF0 - TRNA A64-2'-O-RIBOSYLPHOSPHATE TRANSFERASE Genomic Order:  20
Name:  ? Cagra.1642s0020 Secondary Identifier:  ? PAC:28898833
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1642s0020 0.5kb upstream 0.5kb upstream 3087 true Scaffold1642: 70400-73486 Capsella grandiflora
Cagra.1642s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold1642: 70400-70899 Capsella grandiflora
Cagra.1642s0020 0.5kb downstream 0.5kb downstream 3087 true Scaffold1642: 70900-73986 Capsella grandiflora
Cagra.1642s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold1642: 73487-73986 Capsella grandiflora
Cagra.1642s0020 1.0kb upstream 1.0kb upstream 3587 true Scaffold1642: 69900-73486 Capsella grandiflora
Cagra.1642s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold1642: 69900-70899 Capsella grandiflora
Cagra.1642s0020 1.0kb downstream 1.0kb downstream 3587 true Scaffold1642: 70900-74486 Capsella grandiflora
Cagra.1642s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold1642: 73487-74486 Capsella grandiflora
Cagra.1642s0020 2.0kb upstream 2.0kb upstream 4587 true Scaffold1642: 68900-73486 Capsella grandiflora
Cagra.1642s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold1642: 68900-70899 Capsella grandiflora
Cagra.1642s0020 2.0kb downstream 2.0kb downstream 4587 true Scaffold1642: 70900-75486 Capsella grandiflora
Cagra.1642s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold1642: 73487-75486 Capsella grandiflora
Cagra.1642s0020 5.0kb upstream 5.0kb upstream 7587 true Scaffold1642: 65900-73486 Capsella grandiflora
Cagra.1642s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold1642: 65900-70899 Capsella grandiflora
Cagra.1642s0020 5.0kb downstream 5.0kb downstream 7587 true Scaffold1642: 70900-78486 Capsella grandiflora
Cagra.1642s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold1642: 73487-78486 Capsella grandiflora
Cagra.1642s0020 10.0kb upstream 10.0kb upstream 12587 true Scaffold1642: 60900-73486 Capsella grandiflora
Cagra.1642s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold1642: 60900-70899 Capsella grandiflora
Cagra.1642s0020 10.0kb downstream 10.0kb downstream 12587 true Scaffold1642: 70900-83486 Capsella grandiflora
Cagra.1642s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold1642: 73487-83486 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361083 5261 Brassicaceae View MSA
123832891 5264 Brassicales-Malvales View MSA
124340043 5266 SBM View MSA
124241485 5268 Malvidae View MSA
124064987 5270 Rosid View MSA
123736577 5271 Pentapetalae View MSA
122790906 5272 Eudicot View MSA
122043011 5273 Angiosperm View MSA
121346582 5274 Embryophyte View MSA
123424647 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain