Gene : Cagra.1383s0018 C. grandiflora v1.1
Defline:  (1 of 1) PTHR17985//PTHR17985:SF14 - SER/THR-RICH PROTEIN T10 IN DGCR REGION Genomic Order:  18
Name:  ? Cagra.1383s0018 Secondary Identifier:  ? PAC:28901735
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1383s0018 0.5kb upstream 0.5kb upstream 1791 true Scaffold1383: 53631-55421 Capsella grandiflora
Cagra.1383s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold1383: 54922-55421 Capsella grandiflora
Cagra.1383s0018 0.5kb downstream 0.5kb downstream 1791 true Scaffold1383: 53131-54921 Capsella grandiflora
Cagra.1383s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold1383: 53131-53630 Capsella grandiflora
Cagra.1383s0018 1.0kb upstream 1.0kb upstream 2291 true Scaffold1383: 53631-55921 Capsella grandiflora
Cagra.1383s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold1383: 54922-55921 Capsella grandiflora
Cagra.1383s0018 1.0kb downstream 1.0kb downstream 2291 true Scaffold1383: 52631-54921 Capsella grandiflora
Cagra.1383s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold1383: 52631-53630 Capsella grandiflora
Cagra.1383s0018 2.0kb upstream 2.0kb upstream 3291 true Scaffold1383: 53631-56921 Capsella grandiflora
Cagra.1383s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold1383: 54922-56921 Capsella grandiflora
Cagra.1383s0018 2.0kb downstream 2.0kb downstream 3291 true Scaffold1383: 51631-54921 Capsella grandiflora
Cagra.1383s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold1383: 51631-53630 Capsella grandiflora
Cagra.1383s0018 5.0kb upstream 5.0kb upstream 6291 true Scaffold1383: 53631-59921 Capsella grandiflora
Cagra.1383s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold1383: 54922-59921 Capsella grandiflora
Cagra.1383s0018 5.0kb downstream 5.0kb downstream 6291 true Scaffold1383: 48631-54921 Capsella grandiflora
Cagra.1383s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold1383: 48631-53630 Capsella grandiflora
Cagra.1383s0018 10.0kb upstream 10.0kb upstream 11291 true Scaffold1383: 53631-64921 Capsella grandiflora
Cagra.1383s0018 10.0kb upstream 10.0kb upstream 10000 false Scaffold1383: 54922-64921 Capsella grandiflora
Cagra.1383s0018 10.0kb downstream 10.0kb downstream 11291 true Scaffold1383: 43631-54921 Capsella grandiflora
Cagra.1383s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold1383: 43631-53630 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364431 5261 Brassicaceae View MSA
123836292 5264 Brassicales-Malvales View MSA
124347731 5266 SBM View MSA
124236992 5268 Malvidae View MSA
124064404 5270 Rosid View MSA
123753497 5271 Pentapetalae View MSA
122790502 5272 Eudicot View MSA
122045802 5273 Angiosperm View MSA
121346368 5274 Embryophyte View MSA
123428335 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain