Gene : Cagra.1195s0008 C. grandiflora v1.1
Defline:  (1 of 2) PTHR32295:SF9 - IQ-DOMAIN 9 PROTEIN Genomic Order:  8
Name:  ? Cagra.1195s0008 Secondary Identifier:  ? PAC:28915280
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1195s0008 0.5kb upstream 0.5kb upstream 2530 true Scaffold1195: 24188-26717 Capsella grandiflora
Cagra.1195s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold1195: 24188-24687 Capsella grandiflora
Cagra.1195s0008 0.5kb downstream 0.5kb downstream 2530 true Scaffold1195: 24688-27217 Capsella grandiflora
Cagra.1195s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold1195: 26718-27217 Capsella grandiflora
Cagra.1195s0008 1.0kb upstream 1.0kb upstream 3030 true Scaffold1195: 23688-26717 Capsella grandiflora
Cagra.1195s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold1195: 23688-24687 Capsella grandiflora
Cagra.1195s0008 1.0kb downstream 1.0kb downstream 3030 true Scaffold1195: 24688-27717 Capsella grandiflora
Cagra.1195s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold1195: 26718-27717 Capsella grandiflora
Cagra.1195s0008 2.0kb upstream 2.0kb upstream 4030 true Scaffold1195: 22688-26717 Capsella grandiflora
Cagra.1195s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold1195: 22688-24687 Capsella grandiflora
Cagra.1195s0008 2.0kb downstream 2.0kb downstream 4030 true Scaffold1195: 24688-28717 Capsella grandiflora
Cagra.1195s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold1195: 26718-28717 Capsella grandiflora
Cagra.1195s0008 5.0kb upstream 5.0kb upstream 7030 true Scaffold1195: 19688-26717 Capsella grandiflora
Cagra.1195s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold1195: 19688-24687 Capsella grandiflora
Cagra.1195s0008 5.0kb downstream 5.0kb downstream 7030 true Scaffold1195: 24688-31717 Capsella grandiflora
Cagra.1195s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold1195: 26718-31717 Capsella grandiflora
Cagra.1195s0008 10.0kb upstream 10.0kb upstream 12030 true Scaffold1195: 14688-26717 Capsella grandiflora
Cagra.1195s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold1195: 14688-24687 Capsella grandiflora
Cagra.1195s0008 10.0kb downstream 10.0kb downstream 12030 true Scaffold1195: 24688-36717 Capsella grandiflora
Cagra.1195s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold1195: 26718-36717 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371076 5261 Brassicaceae View MSA
123835931 5264 Brassicales-Malvales View MSA
124338271 5266 SBM View MSA
124238009 5268 Malvidae View MSA
124067076 5270 Rosid View MSA
123750715 5271 Pentapetalae View MSA
122787136 5272 Eudicot View MSA
122044969 5273 Angiosperm View MSA
121310374 5274 Embryophyte View MSA
123347875 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain