Gene : Cagra.1194s0042 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10165:SF80 - LIPID PHOSPHATE PHOSPHATASE 1-RELATED Genomic Order:  42
Name:  ? Cagra.1194s0042 Secondary Identifier:  ? PAC:28912754
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora TRIGLSYN-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1194s0042 0.5kb upstream 0.5kb upstream 3425 true Scaffold1194: 125389-128813 Capsella grandiflora
Cagra.1194s0042 0.5kb upstream 0.5kb upstream 500 false Scaffold1194: 128314-128813 Capsella grandiflora
Cagra.1194s0042 0.5kb downstream 0.5kb downstream 3425 true Scaffold1194: 124889-128313 Capsella grandiflora
Cagra.1194s0042 0.5kb downstream 0.5kb downstream 500 false Scaffold1194: 124889-125388 Capsella grandiflora
Cagra.1194s0042 1.0kb upstream 1.0kb upstream 3925 true Scaffold1194: 125389-129313 Capsella grandiflora
Cagra.1194s0042 1.0kb upstream 1.0kb upstream 1000 false Scaffold1194: 128314-129313 Capsella grandiflora
Cagra.1194s0042 1.0kb downstream 1.0kb downstream 3925 true Scaffold1194: 124389-128313 Capsella grandiflora
Cagra.1194s0042 1.0kb downstream 1.0kb downstream 1000 false Scaffold1194: 124389-125388 Capsella grandiflora
Cagra.1194s0042 2.0kb upstream 2.0kb upstream 4925 true Scaffold1194: 125389-130313 Capsella grandiflora
Cagra.1194s0042 2.0kb upstream 2.0kb upstream 2000 false Scaffold1194: 128314-130313 Capsella grandiflora
Cagra.1194s0042 2.0kb downstream 2.0kb downstream 4925 true Scaffold1194: 123389-128313 Capsella grandiflora
Cagra.1194s0042 2.0kb downstream 2.0kb downstream 2000 false Scaffold1194: 123389-125388 Capsella grandiflora
Cagra.1194s0042 5.0kb upstream 5.0kb upstream 7925 true Scaffold1194: 125389-133313 Capsella grandiflora
Cagra.1194s0042 5.0kb upstream 5.0kb upstream 5000 false Scaffold1194: 128314-133313 Capsella grandiflora
Cagra.1194s0042 5.0kb downstream 5.0kb downstream 7925 true Scaffold1194: 120389-128313 Capsella grandiflora
Cagra.1194s0042 5.0kb downstream 5.0kb downstream 5000 false Scaffold1194: 120389-125388 Capsella grandiflora
Cagra.1194s0042 10.0kb upstream 10.0kb upstream 12925 true Scaffold1194: 125389-138313 Capsella grandiflora
Cagra.1194s0042 10.0kb upstream 10.0kb upstream 10000 false Scaffold1194: 128314-138313 Capsella grandiflora
Cagra.1194s0042 10.0kb downstream 10.0kb downstream 12925 true Scaffold1194: 115389-128313 Capsella grandiflora
Cagra.1194s0042 10.0kb downstream 10.0kb downstream 10000 false Scaffold1194: 115389-125388 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376627 5261 Brassicaceae View MSA
123834144 5264 Brassicales-Malvales View MSA
124348855 5266 SBM View MSA
124248265 5268 Malvidae View MSA
124074068 5270 Rosid View MSA
123752776 5271 Pentapetalae View MSA
122787523 5272 Eudicot View MSA
122042575 5273 Angiosperm View MSA
121350600 5274 Embryophyte View MSA
123428329 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain