Gene : Cagra.1310s0011 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10252//PTHR10252:SF37 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED Genomic Order:  11
Name:  ? Cagra.1310s0011 Secondary Identifier:  ? PAC:28904766
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1310s0011 0.5kb upstream 0.5kb upstream 1476 true Scaffold1310: 47611-49086 Capsella grandiflora
Cagra.1310s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold1310: 48587-49086 Capsella grandiflora
Cagra.1310s0011 0.5kb downstream 0.5kb downstream 1476 true Scaffold1310: 47111-48586 Capsella grandiflora
Cagra.1310s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold1310: 47111-47610 Capsella grandiflora
Cagra.1310s0011 1.0kb upstream 1.0kb upstream 1976 true Scaffold1310: 47611-49586 Capsella grandiflora
Cagra.1310s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold1310: 48587-49586 Capsella grandiflora
Cagra.1310s0011 1.0kb downstream 1.0kb downstream 1976 true Scaffold1310: 46611-48586 Capsella grandiflora
Cagra.1310s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold1310: 46611-47610 Capsella grandiflora
Cagra.1310s0011 2.0kb upstream 2.0kb upstream 2976 true Scaffold1310: 47611-50586 Capsella grandiflora
Cagra.1310s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold1310: 48587-50586 Capsella grandiflora
Cagra.1310s0011 2.0kb downstream 2.0kb downstream 2976 true Scaffold1310: 45611-48586 Capsella grandiflora
Cagra.1310s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold1310: 45611-47610 Capsella grandiflora
Cagra.1310s0011 5.0kb upstream 5.0kb upstream 5976 true Scaffold1310: 47611-53586 Capsella grandiflora
Cagra.1310s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold1310: 48587-53586 Capsella grandiflora
Cagra.1310s0011 5.0kb downstream 5.0kb downstream 5976 true Scaffold1310: 42611-48586 Capsella grandiflora
Cagra.1310s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold1310: 42611-47610 Capsella grandiflora
Cagra.1310s0011 10.0kb upstream 10.0kb upstream 10976 true Scaffold1310: 47611-58586 Capsella grandiflora
Cagra.1310s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold1310: 48587-58586 Capsella grandiflora
Cagra.1310s0011 10.0kb downstream 10.0kb downstream 10976 true Scaffold1310: 37611-48586 Capsella grandiflora
Cagra.1310s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold1310: 37611-47610 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364628 5261 Brassicaceae View MSA
123798795 5264 Brassicales-Malvales View MSA
124296387 5266 SBM View MSA
124248043 5268 Malvidae View MSA
124067484 5270 Rosid View MSA
123752429 5271 Pentapetalae View MSA
122774553 5272 Eudicot View MSA
122049278 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121351220 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain