Gene : Cagra.1305s0015 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13832:SF362 - PROTEIN PHOSPHATASE 2C 63-RELATED Genomic Order:  15
Name:  ? Cagra.1305s0015 Secondary Identifier:  ? PAC:28900647
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1305s0015 0.5kb upstream 0.5kb upstream 2832 true Scaffold1305: 49548-52379 Capsella grandiflora
Cagra.1305s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold1305: 49548-50047 Capsella grandiflora
Cagra.1305s0015 0.5kb downstream 0.5kb downstream 2832 true Scaffold1305: 50048-52879 Capsella grandiflora
Cagra.1305s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold1305: 52380-52879 Capsella grandiflora
Cagra.1305s0015 1.0kb upstream 1.0kb upstream 3332 true Scaffold1305: 49048-52379 Capsella grandiflora
Cagra.1305s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold1305: 49048-50047 Capsella grandiflora
Cagra.1305s0015 1.0kb downstream 1.0kb downstream 3332 true Scaffold1305: 50048-53379 Capsella grandiflora
Cagra.1305s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold1305: 52380-53379 Capsella grandiflora
Cagra.1305s0015 2.0kb upstream 2.0kb upstream 4332 true Scaffold1305: 48048-52379 Capsella grandiflora
Cagra.1305s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold1305: 48048-50047 Capsella grandiflora
Cagra.1305s0015 2.0kb downstream 2.0kb downstream 4332 true Scaffold1305: 50048-54379 Capsella grandiflora
Cagra.1305s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold1305: 52380-54379 Capsella grandiflora
Cagra.1305s0015 5.0kb upstream 5.0kb upstream 7332 true Scaffold1305: 45048-52379 Capsella grandiflora
Cagra.1305s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold1305: 45048-50047 Capsella grandiflora
Cagra.1305s0015 5.0kb downstream 5.0kb downstream 7332 true Scaffold1305: 50048-57379 Capsella grandiflora
Cagra.1305s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold1305: 52380-57379 Capsella grandiflora
Cagra.1305s0015 10.0kb upstream 10.0kb upstream 12332 true Scaffold1305: 40048-52379 Capsella grandiflora
Cagra.1305s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold1305: 40048-50047 Capsella grandiflora
Cagra.1305s0015 10.0kb downstream 10.0kb downstream 12332 true Scaffold1305: 50048-62379 Capsella grandiflora
Cagra.1305s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold1305: 52380-62379 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029851 5273 Angiosperm View MSA
122369513 5261 Brassicaceae View MSA
123827590 5264 Brassicales-Malvales View MSA
124351430 5266 SBM View MSA
124251412 5268 Malvidae View MSA
124066844 5270 Rosid View MSA
123747225 5271 Pentapetalae View MSA
122790095 5272 Eudicot View MSA
121299118 5274 Embryophyte View MSA
123337035 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain