Gene : Cagra.1300s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR32227:SF52 - GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 2 Genomic Order:  2
Name:  ? Cagra.1300s0002 Secondary Identifier:  ? PAC:28895049
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1300s0002 0.5kb upstream 0.5kb upstream 3303 true Scaffold1300: 4478-7780 Capsella grandiflora
Cagra.1300s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold1300: 7281-7780 Capsella grandiflora
Cagra.1300s0002 0.5kb downstream 0.5kb downstream 3303 true Scaffold1300: 3978-7280 Capsella grandiflora
Cagra.1300s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold1300: 3978-4477 Capsella grandiflora
Cagra.1300s0002 1.0kb upstream 1.0kb upstream 3803 true Scaffold1300: 4478-8280 Capsella grandiflora
Cagra.1300s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold1300: 7281-8280 Capsella grandiflora
Cagra.1300s0002 1.0kb downstream 1.0kb downstream 3803 true Scaffold1300: 3478-7280 Capsella grandiflora
Cagra.1300s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold1300: 3478-4477 Capsella grandiflora
Cagra.1300s0002 2.0kb upstream 2.0kb upstream 4803 true Scaffold1300: 4478-9280 Capsella grandiflora
Cagra.1300s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold1300: 7281-9280 Capsella grandiflora
Cagra.1300s0002 2.0kb downstream 2.0kb downstream 4803 true Scaffold1300: 2478-7280 Capsella grandiflora
Cagra.1300s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold1300: 2478-4477 Capsella grandiflora
Cagra.1300s0002 5.0kb upstream 5.0kb upstream 7803 true Scaffold1300: 4478-12280 Capsella grandiflora
Cagra.1300s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold1300: 7281-12280 Capsella grandiflora
Cagra.1300s0002 5.0kb downstream 5.0kb downstream 7280 true Scaffold1300: 1-7280 Capsella grandiflora
Cagra.1300s0002 5.0kb downstream 5.0kb downstream 4477 false Scaffold1300: 1-4477 Capsella grandiflora
Cagra.1300s0002 10.0kb upstream 10.0kb upstream 12803 true Scaffold1300: 4478-17280 Capsella grandiflora
Cagra.1300s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold1300: 7281-17280 Capsella grandiflora
Cagra.1300s0002 10.0kb downstream 10.0kb downstream 7280 true Scaffold1300: 1-7280 Capsella grandiflora
Cagra.1300s0002 10.0kb downstream 10.0kb downstream 4477 false Scaffold1300: 1-4477 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367117 5261 Brassicaceae View MSA
123829570 5264 Brassicales-Malvales View MSA
124342831 5266 SBM View MSA
124238572 5268 Malvidae View MSA
124063315 5270 Rosid View MSA
123741211 5271 Pentapetalae View MSA
122791300 5272 Eudicot View MSA
122043027 5273 Angiosperm View MSA
121351661 5274 Embryophyte View MSA
123382266 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain