Gene : Cagra.1043s0024 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31503:SF1 - VACUOLAR CATION/PROTON EXCHANGER 1-RELATED Genomic Order:  24
Name:  ? Cagra.1043s0024 Secondary Identifier:  ? PAC:28897681
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1043s0024 0.5kb upstream 0.5kb upstream 4012 true Scaffold1043: 74834-78845 Capsella grandiflora
Cagra.1043s0024 0.5kb upstream 0.5kb upstream 500 false Scaffold1043: 78346-78845 Capsella grandiflora
Cagra.1043s0024 0.5kb downstream 0.5kb downstream 4012 true Scaffold1043: 74334-78345 Capsella grandiflora
Cagra.1043s0024 0.5kb downstream 0.5kb downstream 500 false Scaffold1043: 74334-74833 Capsella grandiflora
Cagra.1043s0024 1.0kb upstream 1.0kb upstream 4512 true Scaffold1043: 74834-79345 Capsella grandiflora
Cagra.1043s0024 1.0kb upstream 1.0kb upstream 1000 false Scaffold1043: 78346-79345 Capsella grandiflora
Cagra.1043s0024 1.0kb downstream 1.0kb downstream 4512 true Scaffold1043: 73834-78345 Capsella grandiflora
Cagra.1043s0024 1.0kb downstream 1.0kb downstream 1000 false Scaffold1043: 73834-74833 Capsella grandiflora
Cagra.1043s0024 2.0kb upstream 2.0kb upstream 5512 true Scaffold1043: 74834-80345 Capsella grandiflora
Cagra.1043s0024 2.0kb upstream 2.0kb upstream 2000 false Scaffold1043: 78346-80345 Capsella grandiflora
Cagra.1043s0024 2.0kb downstream 2.0kb downstream 5512 true Scaffold1043: 72834-78345 Capsella grandiflora
Cagra.1043s0024 2.0kb downstream 2.0kb downstream 2000 false Scaffold1043: 72834-74833 Capsella grandiflora
Cagra.1043s0024 5.0kb upstream 5.0kb upstream 8512 true Scaffold1043: 74834-83345 Capsella grandiflora
Cagra.1043s0024 5.0kb upstream 5.0kb upstream 5000 false Scaffold1043: 78346-83345 Capsella grandiflora
Cagra.1043s0024 5.0kb downstream 5.0kb downstream 8512 true Scaffold1043: 69834-78345 Capsella grandiflora
Cagra.1043s0024 5.0kb downstream 5.0kb downstream 5000 false Scaffold1043: 69834-74833 Capsella grandiflora
Cagra.1043s0024 10.0kb upstream 10.0kb upstream 13512 true Scaffold1043: 74834-88345 Capsella grandiflora
Cagra.1043s0024 10.0kb upstream 10.0kb upstream 10000 false Scaffold1043: 78346-88345 Capsella grandiflora
Cagra.1043s0024 10.0kb downstream 10.0kb downstream 13512 true Scaffold1043: 64834-78345 Capsella grandiflora
Cagra.1043s0024 10.0kb downstream 10.0kb downstream 10000 false Scaffold1043: 64834-74833 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360338 5261 Brassicaceae View MSA
123838575 5264 Brassicales-Malvales View MSA
124344676 5266 SBM View MSA
124242914 5268 Malvidae View MSA
124065189 5270 Rosid View MSA
123739014 5271 Pentapetalae View MSA
122792056 5272 Eudicot View MSA
122048075 5273 Angiosperm View MSA
121310844 5274 Embryophyte View MSA
123427763 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain