Gene : Cagra.1131s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23111//PTHR23111:SF40 - ZINC FINGER PROTEIN Genomic Order:  4
Name:  ? Cagra.1131s0004 Secondary Identifier:  ? PAC:28909687
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1131s0004 0.5kb upstream 0.5kb upstream 2912 true Scaffold1131: 9061-11972 Capsella grandiflora
Cagra.1131s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1131: 9061-9560 Capsella grandiflora
Cagra.1131s0004 0.5kb downstream 0.5kb downstream 2912 true Scaffold1131: 9561-12472 Capsella grandiflora
Cagra.1131s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1131: 11973-12472 Capsella grandiflora
Cagra.1131s0004 1.0kb upstream 1.0kb upstream 3412 true Scaffold1131: 8561-11972 Capsella grandiflora
Cagra.1131s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1131: 8561-9560 Capsella grandiflora
Cagra.1131s0004 1.0kb downstream 1.0kb downstream 3412 true Scaffold1131: 9561-12972 Capsella grandiflora
Cagra.1131s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1131: 11973-12972 Capsella grandiflora
Cagra.1131s0004 2.0kb upstream 2.0kb upstream 4412 true Scaffold1131: 7561-11972 Capsella grandiflora
Cagra.1131s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1131: 7561-9560 Capsella grandiflora
Cagra.1131s0004 2.0kb downstream 2.0kb downstream 4412 true Scaffold1131: 9561-13972 Capsella grandiflora
Cagra.1131s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1131: 11973-13972 Capsella grandiflora
Cagra.1131s0004 5.0kb upstream 5.0kb upstream 7412 true Scaffold1131: 4561-11972 Capsella grandiflora
Cagra.1131s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1131: 4561-9560 Capsella grandiflora
Cagra.1131s0004 5.0kb downstream 5.0kb downstream 7412 true Scaffold1131: 9561-16972 Capsella grandiflora
Cagra.1131s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1131: 11973-16972 Capsella grandiflora
Cagra.1131s0004 10.0kb upstream 10.0kb upstream 11972 true Scaffold1131: 1-11972 Capsella grandiflora
Cagra.1131s0004 10.0kb upstream 10.0kb upstream 9560 false Scaffold1131: 1-9560 Capsella grandiflora
Cagra.1131s0004 10.0kb downstream 10.0kb downstream 12412 true Scaffold1131: 9561-21972 Capsella grandiflora
Cagra.1131s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1131: 11973-21972 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372158 5261 Brassicaceae View MSA
123829064 5264 Brassicales-Malvales View MSA
124337976 5266 SBM View MSA
124238473 5268 Malvidae View MSA
124068006 5270 Rosid View MSA
123752037 5271 Pentapetalae View MSA
122793465 5272 Eudicot View MSA
122045549 5273 Angiosperm View MSA
121349230 5274 Embryophyte View MSA
123427278 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain