Gene : Cagra.0897s0068 C. grandiflora v1.1
Defline:  (1 of 2) 6.4.1.4 - Methylcrotonoyl-CoA carboxylase / Methylcrotonyl-CoA carboxylase Genomic Order:  68
Name:  ? Cagra.0897s0068 Secondary Identifier:  ? PAC:28902816
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora LEU-DEG2-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0897s0068 0.5kb upstream 0.5kb upstream 5305 true Scaffold897: 232831-238135 Capsella grandiflora
Cagra.0897s0068 0.5kb upstream 0.5kb upstream 500 false Scaffold897: 237636-238135 Capsella grandiflora
Cagra.0897s0068 0.5kb downstream 0.5kb downstream 5305 true Scaffold897: 232331-237635 Capsella grandiflora
Cagra.0897s0068 0.5kb downstream 0.5kb downstream 500 false Scaffold897: 232331-232830 Capsella grandiflora
Cagra.0897s0068 1.0kb upstream 1.0kb upstream 5805 true Scaffold897: 232831-238635 Capsella grandiflora
Cagra.0897s0068 1.0kb upstream 1.0kb upstream 1000 false Scaffold897: 237636-238635 Capsella grandiflora
Cagra.0897s0068 1.0kb downstream 1.0kb downstream 5805 true Scaffold897: 231831-237635 Capsella grandiflora
Cagra.0897s0068 1.0kb downstream 1.0kb downstream 1000 false Scaffold897: 231831-232830 Capsella grandiflora
Cagra.0897s0068 2.0kb upstream 2.0kb upstream 6805 true Scaffold897: 232831-239635 Capsella grandiflora
Cagra.0897s0068 2.0kb upstream 2.0kb upstream 2000 false Scaffold897: 237636-239635 Capsella grandiflora
Cagra.0897s0068 2.0kb downstream 2.0kb downstream 6805 true Scaffold897: 230831-237635 Capsella grandiflora
Cagra.0897s0068 2.0kb downstream 2.0kb downstream 2000 false Scaffold897: 230831-232830 Capsella grandiflora
Cagra.0897s0068 5.0kb upstream 5.0kb upstream 9805 true Scaffold897: 232831-242635 Capsella grandiflora
Cagra.0897s0068 5.0kb upstream 5.0kb upstream 5000 false Scaffold897: 237636-242635 Capsella grandiflora
Cagra.0897s0068 5.0kb downstream 5.0kb downstream 9805 true Scaffold897: 227831-237635 Capsella grandiflora
Cagra.0897s0068 5.0kb downstream 5.0kb downstream 5000 false Scaffold897: 227831-232830 Capsella grandiflora
Cagra.0897s0068 10.0kb upstream 10.0kb upstream 14805 true Scaffold897: 232831-247635 Capsella grandiflora
Cagra.0897s0068 10.0kb upstream 10.0kb upstream 10000 false Scaffold897: 237636-247635 Capsella grandiflora
Cagra.0897s0068 10.0kb downstream 10.0kb downstream 14805 true Scaffold897: 222831-237635 Capsella grandiflora
Cagra.0897s0068 10.0kb downstream 10.0kb downstream 10000 false Scaffold897: 222831-232830 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373032 5261 Brassicaceae View MSA
123827845 5264 Brassicales-Malvales View MSA
124337820 5266 SBM View MSA
124239007 5268 Malvidae View MSA
124062314 5270 Rosid View MSA
123743627 5271 Pentapetalae View MSA
122788393 5272 Eudicot View MSA
122046633 5273 Angiosperm View MSA
121344540 5274 Embryophyte View MSA
123425779 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain