Gene : Cagra.0914s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11977:SF46 - VILLIN-2-RELATED Genomic Order:  2
Name:  ? Cagra.0914s0002 Secondary Identifier:  ? PAC:28910535
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0914s0002 0.5kb upstream 0.5kb upstream 7838 true Scaffold914: 2473-10310 Capsella grandiflora
Cagra.0914s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold914: 2473-2972 Capsella grandiflora
Cagra.0914s0002 0.5kb downstream 0.5kb downstream 7838 true Scaffold914: 2973-10810 Capsella grandiflora
Cagra.0914s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold914: 10311-10810 Capsella grandiflora
Cagra.0914s0002 1.0kb upstream 1.0kb upstream 8338 true Scaffold914: 1973-10310 Capsella grandiflora
Cagra.0914s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold914: 1973-2972 Capsella grandiflora
Cagra.0914s0002 1.0kb downstream 1.0kb downstream 8338 true Scaffold914: 2973-11310 Capsella grandiflora
Cagra.0914s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold914: 10311-11310 Capsella grandiflora
Cagra.0914s0002 2.0kb upstream 2.0kb upstream 9338 true Scaffold914: 973-10310 Capsella grandiflora
Cagra.0914s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold914: 973-2972 Capsella grandiflora
Cagra.0914s0002 2.0kb downstream 2.0kb downstream 9338 true Scaffold914: 2973-12310 Capsella grandiflora
Cagra.0914s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold914: 10311-12310 Capsella grandiflora
Cagra.0914s0002 5.0kb upstream 5.0kb upstream 10310 true Scaffold914: 1-10310 Capsella grandiflora
Cagra.0914s0002 5.0kb upstream 5.0kb upstream 2972 false Scaffold914: 1-2972 Capsella grandiflora
Cagra.0914s0002 5.0kb downstream 5.0kb downstream 12338 true Scaffold914: 2973-15310 Capsella grandiflora
Cagra.0914s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold914: 10311-15310 Capsella grandiflora
Cagra.0914s0002 10.0kb upstream 10.0kb upstream 10310 true Scaffold914: 1-10310 Capsella grandiflora
Cagra.0914s0002 10.0kb upstream 10.0kb upstream 2972 false Scaffold914: 1-2972 Capsella grandiflora
Cagra.0914s0002 10.0kb downstream 10.0kb downstream 17338 true Scaffold914: 2973-20310 Capsella grandiflora
Cagra.0914s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold914: 10311-20310 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376275 5261 Brassicaceae View MSA
123835797 5264 Brassicales-Malvales View MSA
124336767 5266 SBM View MSA
124242323 5268 Malvidae View MSA
124073983 5270 Rosid View MSA
123746997 5271 Pentapetalae View MSA
122787653 5272 Eudicot View MSA
122045206 5273 Angiosperm View MSA
121349269 5274 Embryophyte View MSA
123428280 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain