Gene : Cagra.0946s0029 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13634 - RIBOSOME BIOGENESIS PROTEIN BRIX Genomic Order:  29
Name:  ? Cagra.0946s0029 Secondary Identifier:  ? PAC:28901674
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0946s0029 0.5kb upstream 0.5kb upstream 2435 true Scaffold946: 106844-109278 Capsella grandiflora
Cagra.0946s0029 0.5kb upstream 0.5kb upstream 500 false Scaffold946: 106844-107343 Capsella grandiflora
Cagra.0946s0029 0.5kb downstream 0.5kb downstream 2435 true Scaffold946: 107344-109778 Capsella grandiflora
Cagra.0946s0029 0.5kb downstream 0.5kb downstream 500 false Scaffold946: 109279-109778 Capsella grandiflora
Cagra.0946s0029 1.0kb upstream 1.0kb upstream 2935 true Scaffold946: 106344-109278 Capsella grandiflora
Cagra.0946s0029 1.0kb upstream 1.0kb upstream 1000 false Scaffold946: 106344-107343 Capsella grandiflora
Cagra.0946s0029 1.0kb downstream 1.0kb downstream 2935 true Scaffold946: 107344-110278 Capsella grandiflora
Cagra.0946s0029 1.0kb downstream 1.0kb downstream 1000 false Scaffold946: 109279-110278 Capsella grandiflora
Cagra.0946s0029 2.0kb upstream 2.0kb upstream 3935 true Scaffold946: 105344-109278 Capsella grandiflora
Cagra.0946s0029 2.0kb upstream 2.0kb upstream 2000 false Scaffold946: 105344-107343 Capsella grandiflora
Cagra.0946s0029 2.0kb downstream 2.0kb downstream 3935 true Scaffold946: 107344-111278 Capsella grandiflora
Cagra.0946s0029 2.0kb downstream 2.0kb downstream 2000 false Scaffold946: 109279-111278 Capsella grandiflora
Cagra.0946s0029 5.0kb upstream 5.0kb upstream 6935 true Scaffold946: 102344-109278 Capsella grandiflora
Cagra.0946s0029 5.0kb upstream 5.0kb upstream 5000 false Scaffold946: 102344-107343 Capsella grandiflora
Cagra.0946s0029 5.0kb downstream 5.0kb downstream 6935 true Scaffold946: 107344-114278 Capsella grandiflora
Cagra.0946s0029 5.0kb downstream 5.0kb downstream 5000 false Scaffold946: 109279-114278 Capsella grandiflora
Cagra.0946s0029 10.0kb upstream 10.0kb upstream 11935 true Scaffold946: 97344-109278 Capsella grandiflora
Cagra.0946s0029 10.0kb upstream 10.0kb upstream 10000 false Scaffold946: 97344-107343 Capsella grandiflora
Cagra.0946s0029 10.0kb downstream 10.0kb downstream 11935 true Scaffold946: 107344-119278 Capsella grandiflora
Cagra.0946s0029 10.0kb downstream 10.0kb downstream 10000 false Scaffold946: 109279-119278 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380176 5261 Brassicaceae View MSA
123834611 5264 Brassicales-Malvales View MSA
124343923 5266 SBM View MSA
124238393 5268 Malvidae View MSA
124066566 5270 Rosid View MSA
123743226 5271 Pentapetalae View MSA
122791953 5272 Eudicot View MSA
122044943 5273 Angiosperm View MSA
121349152 5274 Embryophyte View MSA
123424371 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain