Gene : Cagra.0993s0114 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12300:SF45 - HVA22-LIKE PROTEIN J Genomic Order:  114
Name:  ? Cagra.0993s0114 Secondary Identifier:  ? PAC:28903409
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0993s0114 0.5kb upstream 0.5kb upstream 1674 true Scaffold993: 408826-410499 Capsella grandiflora
Cagra.0993s0114 0.5kb upstream 0.5kb upstream 500 false Scaffold993: 410000-410499 Capsella grandiflora
Cagra.0993s0114 0.5kb downstream 0.5kb downstream 1674 true Scaffold993: 408326-409999 Capsella grandiflora
Cagra.0993s0114 0.5kb downstream 0.5kb downstream 500 false Scaffold993: 408326-408825 Capsella grandiflora
Cagra.0993s0114 1.0kb upstream 1.0kb upstream 2174 true Scaffold993: 408826-410999 Capsella grandiflora
Cagra.0993s0114 1.0kb upstream 1.0kb upstream 1000 false Scaffold993: 410000-410999 Capsella grandiflora
Cagra.0993s0114 1.0kb downstream 1.0kb downstream 2174 true Scaffold993: 407826-409999 Capsella grandiflora
Cagra.0993s0114 1.0kb downstream 1.0kb downstream 1000 false Scaffold993: 407826-408825 Capsella grandiflora
Cagra.0993s0114 2.0kb upstream 2.0kb upstream 3174 true Scaffold993: 408826-411999 Capsella grandiflora
Cagra.0993s0114 2.0kb upstream 2.0kb upstream 2000 false Scaffold993: 410000-411999 Capsella grandiflora
Cagra.0993s0114 2.0kb downstream 2.0kb downstream 3174 true Scaffold993: 406826-409999 Capsella grandiflora
Cagra.0993s0114 2.0kb downstream 2.0kb downstream 2000 false Scaffold993: 406826-408825 Capsella grandiflora
Cagra.0993s0114 5.0kb upstream 5.0kb upstream 6174 true Scaffold993: 408826-414999 Capsella grandiflora
Cagra.0993s0114 5.0kb upstream 5.0kb upstream 5000 false Scaffold993: 410000-414999 Capsella grandiflora
Cagra.0993s0114 5.0kb downstream 5.0kb downstream 6174 true Scaffold993: 403826-409999 Capsella grandiflora
Cagra.0993s0114 5.0kb downstream 5.0kb downstream 5000 false Scaffold993: 403826-408825 Capsella grandiflora
Cagra.0993s0114 10.0kb upstream 10.0kb upstream 11174 true Scaffold993: 408826-419999 Capsella grandiflora
Cagra.0993s0114 10.0kb upstream 10.0kb upstream 10000 false Scaffold993: 410000-419999 Capsella grandiflora
Cagra.0993s0114 10.0kb downstream 10.0kb downstream 11174 true Scaffold993: 398826-409999 Capsella grandiflora
Cagra.0993s0114 10.0kb downstream 10.0kb downstream 10000 false Scaffold993: 398826-408825 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368181 5261 Brassicaceae View MSA
123840690 5264 Brassicales-Malvales View MSA
124343958 5266 SBM View MSA
124254389 5268 Malvidae View MSA
124074738 5270 Rosid View MSA
123753523 5271 Pentapetalae View MSA
122794920 5272 Eudicot View MSA
122050664 5273 Angiosperm View MSA
121348530 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain