Gene : Cagra.0808s0008 C. grandiflora v1.1
Defline:  (1 of 3) 1.5.1.3 - Dihydrofolate reductase / Tetrahydrofolate dehydrogenase Genomic Order:  8
Name:  ? Cagra.0808s0008 Secondary Identifier:  ? PAC:28909002
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-3841 Capsella grandiflora pathologic  
Cgrandiflora PWY-6612 Capsella grandiflora pathologic  
Cgrandiflora PWY-6614 Capsella grandiflora pathologic  
Cgrandiflora PWY-7184 Capsella grandiflora pathologic  
Cgrandiflora PWY-7199 Capsella grandiflora pathologic  
Cgrandiflora PWY-7200 Capsella grandiflora pathologic  
Cgrandiflora PWY-7210 Capsella grandiflora pathologic  
Cgrandiflora PWY-7211 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0808s0008 0.5kb upstream 0.5kb upstream 3453 true Scaffold808: 34802-38254 Capsella grandiflora
Cagra.0808s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold808: 37755-38254 Capsella grandiflora
Cagra.0808s0008 0.5kb downstream 0.5kb downstream 3453 true Scaffold808: 34302-37754 Capsella grandiflora
Cagra.0808s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold808: 34302-34801 Capsella grandiflora
Cagra.0808s0008 1.0kb upstream 1.0kb upstream 3953 true Scaffold808: 34802-38754 Capsella grandiflora
Cagra.0808s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold808: 37755-38754 Capsella grandiflora
Cagra.0808s0008 1.0kb downstream 1.0kb downstream 3953 true Scaffold808: 33802-37754 Capsella grandiflora
Cagra.0808s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold808: 33802-34801 Capsella grandiflora
Cagra.0808s0008 2.0kb upstream 2.0kb upstream 4953 true Scaffold808: 34802-39754 Capsella grandiflora
Cagra.0808s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold808: 37755-39754 Capsella grandiflora
Cagra.0808s0008 2.0kb downstream 2.0kb downstream 4953 true Scaffold808: 32802-37754 Capsella grandiflora
Cagra.0808s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold808: 32802-34801 Capsella grandiflora
Cagra.0808s0008 5.0kb upstream 5.0kb upstream 7953 true Scaffold808: 34802-42754 Capsella grandiflora
Cagra.0808s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold808: 37755-42754 Capsella grandiflora
Cagra.0808s0008 5.0kb downstream 5.0kb downstream 7953 true Scaffold808: 29802-37754 Capsella grandiflora
Cagra.0808s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold808: 29802-34801 Capsella grandiflora
Cagra.0808s0008 10.0kb upstream 10.0kb upstream 12953 true Scaffold808: 34802-47754 Capsella grandiflora
Cagra.0808s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold808: 37755-47754 Capsella grandiflora
Cagra.0808s0008 10.0kb downstream 10.0kb downstream 12953 true Scaffold808: 24802-37754 Capsella grandiflora
Cagra.0808s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold808: 24802-34801 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367382 5261 Brassicaceae View MSA
123840013 5264 Brassicales-Malvales View MSA
124341694 5266 SBM View MSA
124241487 5268 Malvidae View MSA
124063247 5270 Rosid View MSA
123746183 5271 Pentapetalae View MSA
122795819 5272 Eudicot View MSA
122041907 5273 Angiosperm View MSA
121345404 5274 Embryophyte View MSA
123424391 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain