Gene : Cagra.0876s0013 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31042:SF10 - CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE-LIKE PROTEIN Genomic Order:  13
Name:  ? Cagra.0876s0013 Secondary Identifier:  ? PAC:28899239
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0876s0013 0.5kb upstream 0.5kb upstream 2933 true Scaffold876: 36028-38960 Capsella grandiflora
Cagra.0876s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold876: 38461-38960 Capsella grandiflora
Cagra.0876s0013 0.5kb downstream 0.5kb downstream 2933 true Scaffold876: 35528-38460 Capsella grandiflora
Cagra.0876s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold876: 35528-36027 Capsella grandiflora
Cagra.0876s0013 1.0kb upstream 1.0kb upstream 3433 true Scaffold876: 36028-39460 Capsella grandiflora
Cagra.0876s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold876: 38461-39460 Capsella grandiflora
Cagra.0876s0013 1.0kb downstream 1.0kb downstream 3433 true Scaffold876: 35028-38460 Capsella grandiflora
Cagra.0876s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold876: 35028-36027 Capsella grandiflora
Cagra.0876s0013 2.0kb upstream 2.0kb upstream 4433 true Scaffold876: 36028-40460 Capsella grandiflora
Cagra.0876s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold876: 38461-40460 Capsella grandiflora
Cagra.0876s0013 2.0kb downstream 2.0kb downstream 4433 true Scaffold876: 34028-38460 Capsella grandiflora
Cagra.0876s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold876: 34028-36027 Capsella grandiflora
Cagra.0876s0013 5.0kb upstream 5.0kb upstream 7433 true Scaffold876: 36028-43460 Capsella grandiflora
Cagra.0876s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold876: 38461-43460 Capsella grandiflora
Cagra.0876s0013 5.0kb downstream 5.0kb downstream 7433 true Scaffold876: 31028-38460 Capsella grandiflora
Cagra.0876s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold876: 31028-36027 Capsella grandiflora
Cagra.0876s0013 10.0kb upstream 10.0kb upstream 12433 true Scaffold876: 36028-48460 Capsella grandiflora
Cagra.0876s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold876: 38461-48460 Capsella grandiflora
Cagra.0876s0013 10.0kb downstream 10.0kb downstream 12433 true Scaffold876: 26028-38460 Capsella grandiflora
Cagra.0876s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold876: 26028-36027 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364986 5261 Brassicaceae View MSA
123798874 5264 Brassicales-Malvales View MSA
124296452 5266 SBM View MSA
124148601 5268 Malvidae View MSA
123874564 5270 Rosid View MSA
123458519 5271 Pentapetalae View MSA
122493924 5272 Eudicot View MSA
122051448 5273 Angiosperm View MSA
121351490 5274 Embryophyte View MSA
123428085 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain