Gene : Cagra.0878s0012 C. grandiflora v1.1
Defline:  (1 of 11) PF12734 - Cysteine-rich TM module stress tolerance (CYSTM) Genomic Order:  12
Name:  ? Cagra.0878s0012 Secondary Identifier:  ? PAC:28911210
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0878s0012 0.5kb upstream 0.5kb upstream 1318 true Scaffold878: 48920-50237 Capsella grandiflora
Cagra.0878s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold878: 49738-50237 Capsella grandiflora
Cagra.0878s0012 0.5kb downstream 0.5kb downstream 1318 true Scaffold878: 48420-49737 Capsella grandiflora
Cagra.0878s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold878: 48420-48919 Capsella grandiflora
Cagra.0878s0012 1.0kb upstream 1.0kb upstream 1818 true Scaffold878: 48920-50737 Capsella grandiflora
Cagra.0878s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold878: 49738-50737 Capsella grandiflora
Cagra.0878s0012 1.0kb downstream 1.0kb downstream 1818 true Scaffold878: 47920-49737 Capsella grandiflora
Cagra.0878s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold878: 47920-48919 Capsella grandiflora
Cagra.0878s0012 2.0kb upstream 2.0kb upstream 2818 true Scaffold878: 48920-51737 Capsella grandiflora
Cagra.0878s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold878: 49738-51737 Capsella grandiflora
Cagra.0878s0012 2.0kb downstream 2.0kb downstream 2818 true Scaffold878: 46920-49737 Capsella grandiflora
Cagra.0878s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold878: 46920-48919 Capsella grandiflora
Cagra.0878s0012 5.0kb upstream 5.0kb upstream 5818 true Scaffold878: 48920-54737 Capsella grandiflora
Cagra.0878s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold878: 49738-54737 Capsella grandiflora
Cagra.0878s0012 5.0kb downstream 5.0kb downstream 5818 true Scaffold878: 43920-49737 Capsella grandiflora
Cagra.0878s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold878: 43920-48919 Capsella grandiflora
Cagra.0878s0012 10.0kb upstream 10.0kb upstream 10818 true Scaffold878: 48920-59737 Capsella grandiflora
Cagra.0878s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold878: 49738-59737 Capsella grandiflora
Cagra.0878s0012 10.0kb downstream 10.0kb downstream 10818 true Scaffold878: 38920-49737 Capsella grandiflora
Cagra.0878s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold878: 38920-48919 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369815 5261 Brassicaceae View MSA
123836152 5264 Brassicales-Malvales View MSA
124342455 5266 SBM View MSA
124244596 5268 Malvidae View MSA
124074312 5270 Rosid View MSA
123741317 5271 Pentapetalae View MSA
122791378 5272 Eudicot View MSA
122050585 5273 Angiosperm View MSA
121312007 5274 Embryophyte View MSA
123349224 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain