Gene : Cagra.0666s0015 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22957:SF328 - RABGAP/TBC DOMAIN-CONTAINING PROTEIN Genomic Order:  15
Name:  ? Cagra.0666s0015 Secondary Identifier:  ? PAC:28911301
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0666s0015 0.5kb upstream 0.5kb upstream 5701 true Scaffold666: 54828-60528 Capsella grandiflora
Cagra.0666s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold666: 54828-55327 Capsella grandiflora
Cagra.0666s0015 0.5kb downstream 0.5kb downstream 5701 true Scaffold666: 55328-61028 Capsella grandiflora
Cagra.0666s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold666: 60529-61028 Capsella grandiflora
Cagra.0666s0015 1.0kb upstream 1.0kb upstream 6201 true Scaffold666: 54328-60528 Capsella grandiflora
Cagra.0666s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold666: 54328-55327 Capsella grandiflora
Cagra.0666s0015 1.0kb downstream 1.0kb downstream 6201 true Scaffold666: 55328-61528 Capsella grandiflora
Cagra.0666s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold666: 60529-61528 Capsella grandiflora
Cagra.0666s0015 2.0kb upstream 2.0kb upstream 7201 true Scaffold666: 53328-60528 Capsella grandiflora
Cagra.0666s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold666: 53328-55327 Capsella grandiflora
Cagra.0666s0015 2.0kb downstream 2.0kb downstream 7201 true Scaffold666: 55328-62528 Capsella grandiflora
Cagra.0666s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold666: 60529-62528 Capsella grandiflora
Cagra.0666s0015 5.0kb upstream 5.0kb upstream 10201 true Scaffold666: 50328-60528 Capsella grandiflora
Cagra.0666s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold666: 50328-55327 Capsella grandiflora
Cagra.0666s0015 5.0kb downstream 5.0kb downstream 10201 true Scaffold666: 55328-65528 Capsella grandiflora
Cagra.0666s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold666: 60529-65528 Capsella grandiflora
Cagra.0666s0015 10.0kb upstream 10.0kb upstream 15201 true Scaffold666: 45328-60528 Capsella grandiflora
Cagra.0666s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold666: 45328-55327 Capsella grandiflora
Cagra.0666s0015 10.0kb downstream 10.0kb downstream 15201 true Scaffold666: 55328-70528 Capsella grandiflora
Cagra.0666s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold666: 60529-70528 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373579 5261 Brassicaceae View MSA
123833802 5264 Brassicales-Malvales View MSA
124336749 5266 SBM View MSA
124239393 5268 Malvidae View MSA
124069487 5270 Rosid View MSA
123745324 5271 Pentapetalae View MSA
122795755 5272 Eudicot View MSA
122044400 5273 Angiosperm View MSA
121345248 5274 Embryophyte View MSA
123428184 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain