Gene : Cagra.0690s0040 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12917:SF1 - AT13091P Genomic Order:  40
Name:  ? Cagra.0690s0040 Secondary Identifier:  ? PAC:28893749
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0690s0040 0.5kb upstream 0.5kb upstream 3688 true Scaffold690: 172517-176204 Capsella grandiflora
Cagra.0690s0040 0.5kb upstream 0.5kb upstream 500 false Scaffold690: 172517-173016 Capsella grandiflora
Cagra.0690s0040 0.5kb downstream 0.5kb downstream 3688 true Scaffold690: 173017-176704 Capsella grandiflora
Cagra.0690s0040 0.5kb downstream 0.5kb downstream 500 false Scaffold690: 176205-176704 Capsella grandiflora
Cagra.0690s0040 1.0kb upstream 1.0kb upstream 4188 true Scaffold690: 172017-176204 Capsella grandiflora
Cagra.0690s0040 1.0kb upstream 1.0kb upstream 1000 false Scaffold690: 172017-173016 Capsella grandiflora
Cagra.0690s0040 1.0kb downstream 1.0kb downstream 4188 true Scaffold690: 173017-177204 Capsella grandiflora
Cagra.0690s0040 1.0kb downstream 1.0kb downstream 1000 false Scaffold690: 176205-177204 Capsella grandiflora
Cagra.0690s0040 2.0kb upstream 2.0kb upstream 5188 true Scaffold690: 171017-176204 Capsella grandiflora
Cagra.0690s0040 2.0kb upstream 2.0kb upstream 2000 false Scaffold690: 171017-173016 Capsella grandiflora
Cagra.0690s0040 2.0kb downstream 2.0kb downstream 5188 true Scaffold690: 173017-178204 Capsella grandiflora
Cagra.0690s0040 2.0kb downstream 2.0kb downstream 2000 false Scaffold690: 176205-178204 Capsella grandiflora
Cagra.0690s0040 5.0kb upstream 5.0kb upstream 8188 true Scaffold690: 168017-176204 Capsella grandiflora
Cagra.0690s0040 5.0kb upstream 5.0kb upstream 5000 false Scaffold690: 168017-173016 Capsella grandiflora
Cagra.0690s0040 5.0kb downstream 5.0kb downstream 8188 true Scaffold690: 173017-181204 Capsella grandiflora
Cagra.0690s0040 5.0kb downstream 5.0kb downstream 5000 false Scaffold690: 176205-181204 Capsella grandiflora
Cagra.0690s0040 10.0kb upstream 10.0kb upstream 13188 true Scaffold690: 163017-176204 Capsella grandiflora
Cagra.0690s0040 10.0kb upstream 10.0kb upstream 10000 false Scaffold690: 163017-173016 Capsella grandiflora
Cagra.0690s0040 10.0kb downstream 10.0kb downstream 13188 true Scaffold690: 173017-186204 Capsella grandiflora
Cagra.0690s0040 10.0kb downstream 10.0kb downstream 10000 false Scaffold690: 176205-186204 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366727 5261 Brassicaceae View MSA
123834951 5264 Brassicales-Malvales View MSA
124350826 5266 SBM View MSA
124240727 5268 Malvidae View MSA
124068287 5270 Rosid View MSA
123746680 5271 Pentapetalae View MSA
122792691 5272 Eudicot View MSA
122047571 5273 Angiosperm View MSA
121343926 5274 Embryophyte View MSA
123424063 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain