Gene : Cagra.0573s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11699:SF171 - ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC Genomic Order:  2
Name:  ? Cagra.0573s0002 Secondary Identifier:  ? PAC:28894472
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-2724 Capsella grandiflora pathologic  
Cgrandiflora PWY-6054 Capsella grandiflora pathologic  
Cgrandiflora PWY66-21 Capsella grandiflora pathologic  
Cgrandiflora PWY66-389 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0573s0002 0.5kb upstream 0.5kb upstream 4377 true Scaffold573: 1633-6009 Capsella grandiflora
Cagra.0573s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold573: 5510-6009 Capsella grandiflora
Cagra.0573s0002 0.5kb downstream 0.5kb downstream 4377 true Scaffold573: 1133-5509 Capsella grandiflora
Cagra.0573s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold573: 1133-1632 Capsella grandiflora
Cagra.0573s0002 1.0kb upstream 1.0kb upstream 4877 true Scaffold573: 1633-6509 Capsella grandiflora
Cagra.0573s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold573: 5510-6509 Capsella grandiflora
Cagra.0573s0002 1.0kb downstream 1.0kb downstream 4877 true Scaffold573: 633-5509 Capsella grandiflora
Cagra.0573s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold573: 633-1632 Capsella grandiflora
Cagra.0573s0002 2.0kb upstream 2.0kb upstream 5877 true Scaffold573: 1633-7509 Capsella grandiflora
Cagra.0573s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold573: 5510-7509 Capsella grandiflora
Cagra.0573s0002 2.0kb downstream 2.0kb downstream 5509 true Scaffold573: 1-5509 Capsella grandiflora
Cagra.0573s0002 2.0kb downstream 2.0kb downstream 1632 false Scaffold573: 1-1632 Capsella grandiflora
Cagra.0573s0002 5.0kb upstream 5.0kb upstream 7959 true Scaffold573: 1633-9591 Capsella grandiflora
Cagra.0573s0002 5.0kb upstream 5.0kb upstream 4082 false Scaffold573: 5510-9591 Capsella grandiflora
Cagra.0573s0002 5.0kb downstream 5.0kb downstream 5509 true Scaffold573: 1-5509 Capsella grandiflora
Cagra.0573s0002 5.0kb downstream 5.0kb downstream 1632 false Scaffold573: 1-1632 Capsella grandiflora
Cagra.0573s0002 10.0kb upstream 10.0kb upstream 7959 true Scaffold573: 1633-9591 Capsella grandiflora
Cagra.0573s0002 10.0kb upstream 10.0kb upstream 4082 false Scaffold573: 5510-9591 Capsella grandiflora
Cagra.0573s0002 10.0kb downstream 10.0kb downstream 5509 true Scaffold573: 1-5509 Capsella grandiflora
Cagra.0573s0002 10.0kb downstream 10.0kb downstream 1632 false Scaffold573: 1-1632 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363292 5261 Brassicaceae View MSA
123836527 5264 Brassicales-Malvales View MSA
124343189 5266 SBM View MSA
124240388 5268 Malvidae View MSA
124071959 5270 Rosid View MSA
123741483 5271 Pentapetalae View MSA
122790699 5272 Eudicot View MSA
122047593 5273 Angiosperm View MSA
121349887 5274 Embryophyte View MSA
123425420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain