Gene : Cagra.0605s0087 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22298:SF28 - ENDOGLUCANASE 4-RELATED Genomic Order:  87
Name:  ? Cagra.0605s0087 Secondary Identifier:  ? PAC:28917809
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0605s0087 0.5kb upstream 0.5kb upstream 2577 true Scaffold605: 271818-274394 Capsella grandiflora
Cagra.0605s0087 0.5kb upstream 0.5kb upstream 500 false Scaffold605: 273895-274394 Capsella grandiflora
Cagra.0605s0087 0.5kb downstream 0.5kb downstream 2577 true Scaffold605: 271318-273894 Capsella grandiflora
Cagra.0605s0087 0.5kb downstream 0.5kb downstream 500 false Scaffold605: 271318-271817 Capsella grandiflora
Cagra.0605s0087 1.0kb upstream 1.0kb upstream 3077 true Scaffold605: 271818-274894 Capsella grandiflora
Cagra.0605s0087 1.0kb upstream 1.0kb upstream 1000 false Scaffold605: 273895-274894 Capsella grandiflora
Cagra.0605s0087 1.0kb downstream 1.0kb downstream 3077 true Scaffold605: 270818-273894 Capsella grandiflora
Cagra.0605s0087 1.0kb downstream 1.0kb downstream 1000 false Scaffold605: 270818-271817 Capsella grandiflora
Cagra.0605s0087 2.0kb upstream 2.0kb upstream 4077 true Scaffold605: 271818-275894 Capsella grandiflora
Cagra.0605s0087 2.0kb upstream 2.0kb upstream 2000 false Scaffold605: 273895-275894 Capsella grandiflora
Cagra.0605s0087 2.0kb downstream 2.0kb downstream 4077 true Scaffold605: 269818-273894 Capsella grandiflora
Cagra.0605s0087 2.0kb downstream 2.0kb downstream 2000 false Scaffold605: 269818-271817 Capsella grandiflora
Cagra.0605s0087 5.0kb upstream 5.0kb upstream 7077 true Scaffold605: 271818-278894 Capsella grandiflora
Cagra.0605s0087 5.0kb upstream 5.0kb upstream 5000 false Scaffold605: 273895-278894 Capsella grandiflora
Cagra.0605s0087 5.0kb downstream 5.0kb downstream 7077 true Scaffold605: 266818-273894 Capsella grandiflora
Cagra.0605s0087 5.0kb downstream 5.0kb downstream 5000 false Scaffold605: 266818-271817 Capsella grandiflora
Cagra.0605s0087 10.0kb upstream 10.0kb upstream 12077 true Scaffold605: 271818-283894 Capsella grandiflora
Cagra.0605s0087 10.0kb upstream 10.0kb upstream 10000 false Scaffold605: 273895-283894 Capsella grandiflora
Cagra.0605s0087 10.0kb downstream 10.0kb downstream 12077 true Scaffold605: 261818-273894 Capsella grandiflora
Cagra.0605s0087 10.0kb downstream 10.0kb downstream 10000 false Scaffold605: 261818-271817 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377964 5261 Brassicaceae View MSA
123801688 5264 Brassicales-Malvales View MSA
124298964 5266 SBM View MSA
124150493 5268 Malvidae View MSA
123876094 5270 Rosid View MSA
123753094 5271 Pentapetalae View MSA
122792910 5272 Eudicot View MSA
122045461 5273 Angiosperm View MSA
121349892 5274 Embryophyte View MSA
123381487 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain