Gene : Cagra.0605s0078 C. grandiflora v1.1
Defline:  (1 of 3) PTHR11206:SF79 - MATE EFFLUX FAMILY PROTEIN Genomic Order:  78
Name:  ? Cagra.0605s0078 Secondary Identifier:  ? PAC:28917886
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0605s0078 0.5kb upstream 0.5kb upstream 2837 true Scaffold605: 247147-249983 Capsella grandiflora
Cagra.0605s0078 0.5kb upstream 0.5kb upstream 500 false Scaffold605: 247147-247646 Capsella grandiflora
Cagra.0605s0078 0.5kb downstream 0.5kb downstream 2837 true Scaffold605: 247647-250483 Capsella grandiflora
Cagra.0605s0078 0.5kb downstream 0.5kb downstream 500 false Scaffold605: 249984-250483 Capsella grandiflora
Cagra.0605s0078 1.0kb upstream 1.0kb upstream 3337 true Scaffold605: 246647-249983 Capsella grandiflora
Cagra.0605s0078 1.0kb upstream 1.0kb upstream 1000 false Scaffold605: 246647-247646 Capsella grandiflora
Cagra.0605s0078 1.0kb downstream 1.0kb downstream 3337 true Scaffold605: 247647-250983 Capsella grandiflora
Cagra.0605s0078 1.0kb downstream 1.0kb downstream 1000 false Scaffold605: 249984-250983 Capsella grandiflora
Cagra.0605s0078 2.0kb upstream 2.0kb upstream 4337 true Scaffold605: 245647-249983 Capsella grandiflora
Cagra.0605s0078 2.0kb upstream 2.0kb upstream 2000 false Scaffold605: 245647-247646 Capsella grandiflora
Cagra.0605s0078 2.0kb downstream 2.0kb downstream 4337 true Scaffold605: 247647-251983 Capsella grandiflora
Cagra.0605s0078 2.0kb downstream 2.0kb downstream 2000 false Scaffold605: 249984-251983 Capsella grandiflora
Cagra.0605s0078 5.0kb upstream 5.0kb upstream 7337 true Scaffold605: 242647-249983 Capsella grandiflora
Cagra.0605s0078 5.0kb upstream 5.0kb upstream 5000 false Scaffold605: 242647-247646 Capsella grandiflora
Cagra.0605s0078 5.0kb downstream 5.0kb downstream 7337 true Scaffold605: 247647-254983 Capsella grandiflora
Cagra.0605s0078 5.0kb downstream 5.0kb downstream 5000 false Scaffold605: 249984-254983 Capsella grandiflora
Cagra.0605s0078 10.0kb upstream 10.0kb upstream 12337 true Scaffold605: 237647-249983 Capsella grandiflora
Cagra.0605s0078 10.0kb upstream 10.0kb upstream 10000 false Scaffold605: 237647-247646 Capsella grandiflora
Cagra.0605s0078 10.0kb downstream 10.0kb downstream 12337 true Scaffold605: 247647-259983 Capsella grandiflora
Cagra.0605s0078 10.0kb downstream 10.0kb downstream 10000 false Scaffold605: 249984-259983 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379365 5261 Brassicaceae View MSA
123802228 5264 Brassicales-Malvales View MSA
124299440 5266 SBM View MSA
124150854 5268 Malvidae View MSA
123876398 5270 Rosid View MSA
123460080 5271 Pentapetalae View MSA
122797339 5272 Eudicot View MSA
122050809 5273 Angiosperm View MSA
121344541 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain