Gene : Cagra.0537s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31251:SF22 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 15-RELATED Genomic Order:  3
Name:  ? Cagra.0537s0003 Secondary Identifier:  ? PAC:28911711
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0537s0003 0.5kb upstream 0.5kb upstream 2895 true Scaffold537: 14301-17195 Capsella grandiflora
Cagra.0537s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold537: 14301-14800 Capsella grandiflora
Cagra.0537s0003 0.5kb downstream 0.5kb downstream 2895 true Scaffold537: 14801-17695 Capsella grandiflora
Cagra.0537s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold537: 17196-17695 Capsella grandiflora
Cagra.0537s0003 1.0kb upstream 1.0kb upstream 3395 true Scaffold537: 13801-17195 Capsella grandiflora
Cagra.0537s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold537: 13801-14800 Capsella grandiflora
Cagra.0537s0003 1.0kb downstream 1.0kb downstream 3395 true Scaffold537: 14801-18195 Capsella grandiflora
Cagra.0537s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold537: 17196-18195 Capsella grandiflora
Cagra.0537s0003 2.0kb upstream 2.0kb upstream 4395 true Scaffold537: 12801-17195 Capsella grandiflora
Cagra.0537s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold537: 12801-14800 Capsella grandiflora
Cagra.0537s0003 2.0kb downstream 2.0kb downstream 4395 true Scaffold537: 14801-19195 Capsella grandiflora
Cagra.0537s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold537: 17196-19195 Capsella grandiflora
Cagra.0537s0003 5.0kb upstream 5.0kb upstream 7395 true Scaffold537: 9801-17195 Capsella grandiflora
Cagra.0537s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold537: 9801-14800 Capsella grandiflora
Cagra.0537s0003 5.0kb downstream 5.0kb downstream 7395 true Scaffold537: 14801-22195 Capsella grandiflora
Cagra.0537s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold537: 17196-22195 Capsella grandiflora
Cagra.0537s0003 10.0kb upstream 10.0kb upstream 12395 true Scaffold537: 4801-17195 Capsella grandiflora
Cagra.0537s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold537: 4801-14800 Capsella grandiflora
Cagra.0537s0003 10.0kb downstream 10.0kb downstream 12395 true Scaffold537: 14801-27195 Capsella grandiflora
Cagra.0537s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold537: 17196-27195 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377203 5261 Brassicaceae View MSA
123831413 5264 Brassicales-Malvales View MSA
124347361 5266 SBM View MSA
124246307 5268 Malvidae View MSA
124069639 5270 Rosid View MSA
123751370 5271 Pentapetalae View MSA
122794305 5272 Eudicot View MSA
122050333 5273 Angiosperm View MSA
123428908 5275 Viridiplantae View MSA
121351727 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain