Gene : Cagra.0562s0038 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10799:SF573 - TRANSCRIPTION TERMINATION FACTOR 2 Genomic Order:  38
Name:  ? Cagra.0562s0038 Secondary Identifier:  ? PAC:28910821
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0562s0038 0.5kb upstream 0.5kb upstream 5621 true Scaffold562: 137288-142908 Capsella grandiflora
Cagra.0562s0038 0.5kb upstream 0.5kb upstream 500 false Scaffold562: 142409-142908 Capsella grandiflora
Cagra.0562s0038 0.5kb downstream 0.5kb downstream 5621 true Scaffold562: 136788-142408 Capsella grandiflora
Cagra.0562s0038 0.5kb downstream 0.5kb downstream 500 false Scaffold562: 136788-137287 Capsella grandiflora
Cagra.0562s0038 1.0kb upstream 1.0kb upstream 6121 true Scaffold562: 137288-143408 Capsella grandiflora
Cagra.0562s0038 1.0kb upstream 1.0kb upstream 1000 false Scaffold562: 142409-143408 Capsella grandiflora
Cagra.0562s0038 1.0kb downstream 1.0kb downstream 6121 true Scaffold562: 136288-142408 Capsella grandiflora
Cagra.0562s0038 1.0kb downstream 1.0kb downstream 1000 false Scaffold562: 136288-137287 Capsella grandiflora
Cagra.0562s0038 2.0kb upstream 2.0kb upstream 7121 true Scaffold562: 137288-144408 Capsella grandiflora
Cagra.0562s0038 2.0kb upstream 2.0kb upstream 2000 false Scaffold562: 142409-144408 Capsella grandiflora
Cagra.0562s0038 2.0kb downstream 2.0kb downstream 7121 true Scaffold562: 135288-142408 Capsella grandiflora
Cagra.0562s0038 2.0kb downstream 2.0kb downstream 2000 false Scaffold562: 135288-137287 Capsella grandiflora
Cagra.0562s0038 5.0kb upstream 5.0kb upstream 10121 true Scaffold562: 137288-147408 Capsella grandiflora
Cagra.0562s0038 5.0kb upstream 5.0kb upstream 5000 false Scaffold562: 142409-147408 Capsella grandiflora
Cagra.0562s0038 5.0kb downstream 5.0kb downstream 10121 true Scaffold562: 132288-142408 Capsella grandiflora
Cagra.0562s0038 5.0kb downstream 5.0kb downstream 5000 false Scaffold562: 132288-137287 Capsella grandiflora
Cagra.0562s0038 10.0kb upstream 10.0kb upstream 15121 true Scaffold562: 137288-152408 Capsella grandiflora
Cagra.0562s0038 10.0kb upstream 10.0kb upstream 10000 false Scaffold562: 142409-152408 Capsella grandiflora
Cagra.0562s0038 10.0kb downstream 10.0kb downstream 15121 true Scaffold562: 127288-142408 Capsella grandiflora
Cagra.0562s0038 10.0kb downstream 10.0kb downstream 10000 false Scaffold562: 127288-137287 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364481 5261 Brassicaceae View MSA
123834595 5264 Brassicales-Malvales View MSA
124344795 5266 SBM View MSA
124237077 5268 Malvidae View MSA
124067561 5270 Rosid View MSA
123738895 5271 Pentapetalae View MSA
122788096 5272 Eudicot View MSA
122041978 5273 Angiosperm View MSA
121346055 5274 Embryophyte View MSA
123424068 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain