Gene : Cagra.0342s0019 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11706:SF8 - METAL TRANSPORTER NRAMP1 HOMOLOG Genomic Order:  19
Name:  ? Cagra.0342s0019 Secondary Identifier:  ? PAC:28909937
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0342s0019 0.5kb upstream 0.5kb upstream 2468 true Scaffold342: 66929-69396 Capsella grandiflora
Cagra.0342s0019 0.5kb upstream 0.5kb upstream 500 false Scaffold342: 66929-67428 Capsella grandiflora
Cagra.0342s0019 0.5kb downstream 0.5kb downstream 2468 true Scaffold342: 67429-69896 Capsella grandiflora
Cagra.0342s0019 0.5kb downstream 0.5kb downstream 500 false Scaffold342: 69397-69896 Capsella grandiflora
Cagra.0342s0019 1.0kb upstream 1.0kb upstream 2968 true Scaffold342: 66429-69396 Capsella grandiflora
Cagra.0342s0019 1.0kb upstream 1.0kb upstream 1000 false Scaffold342: 66429-67428 Capsella grandiflora
Cagra.0342s0019 1.0kb downstream 1.0kb downstream 2968 true Scaffold342: 67429-70396 Capsella grandiflora
Cagra.0342s0019 1.0kb downstream 1.0kb downstream 1000 false Scaffold342: 69397-70396 Capsella grandiflora
Cagra.0342s0019 2.0kb upstream 2.0kb upstream 3968 true Scaffold342: 65429-69396 Capsella grandiflora
Cagra.0342s0019 2.0kb upstream 2.0kb upstream 2000 false Scaffold342: 65429-67428 Capsella grandiflora
Cagra.0342s0019 2.0kb downstream 2.0kb downstream 3968 true Scaffold342: 67429-71396 Capsella grandiflora
Cagra.0342s0019 2.0kb downstream 2.0kb downstream 2000 false Scaffold342: 69397-71396 Capsella grandiflora
Cagra.0342s0019 5.0kb upstream 5.0kb upstream 6968 true Scaffold342: 62429-69396 Capsella grandiflora
Cagra.0342s0019 5.0kb upstream 5.0kb upstream 5000 false Scaffold342: 62429-67428 Capsella grandiflora
Cagra.0342s0019 5.0kb downstream 5.0kb downstream 6968 true Scaffold342: 67429-74396 Capsella grandiflora
Cagra.0342s0019 5.0kb downstream 5.0kb downstream 5000 false Scaffold342: 69397-74396 Capsella grandiflora
Cagra.0342s0019 10.0kb upstream 10.0kb upstream 11968 true Scaffold342: 57429-69396 Capsella grandiflora
Cagra.0342s0019 10.0kb upstream 10.0kb upstream 10000 false Scaffold342: 57429-67428 Capsella grandiflora
Cagra.0342s0019 10.0kb downstream 10.0kb downstream 11968 true Scaffold342: 67429-79396 Capsella grandiflora
Cagra.0342s0019 10.0kb downstream 10.0kb downstream 10000 false Scaffold342: 69397-79396 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375206 5261 Brassicaceae View MSA
123800902 5264 Brassicales-Malvales View MSA
124298262 5266 SBM View MSA
124250238 5268 Malvidae View MSA
124067553 5270 Rosid View MSA
123745753 5271 Pentapetalae View MSA
122790542 5272 Eudicot View MSA
122045270 5273 Angiosperm View MSA
121347104 5274 Embryophyte View MSA
123426907 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain