Gene : Cagra.0352s0032 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24286:SF67 - ENT-KAURENOIC ACID OXIDASE 1-RELATED Genomic Order:  32
Name:  ? Cagra.0352s0032 Secondary Identifier:  ? PAC:28897287
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5034 Capsella grandiflora pathologic  
Cgrandiflora PWY-5053 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0352s0032 0.5kb upstream 0.5kb upstream 4021 true Scaffold352: 127461-131481 Capsella grandiflora
Cagra.0352s0032 0.5kb upstream 0.5kb upstream 500 false Scaffold352: 127461-127960 Capsella grandiflora
Cagra.0352s0032 0.5kb downstream 0.5kb downstream 4021 true Scaffold352: 127961-131981 Capsella grandiflora
Cagra.0352s0032 0.5kb downstream 0.5kb downstream 500 false Scaffold352: 131482-131981 Capsella grandiflora
Cagra.0352s0032 1.0kb upstream 1.0kb upstream 4521 true Scaffold352: 126961-131481 Capsella grandiflora
Cagra.0352s0032 1.0kb upstream 1.0kb upstream 1000 false Scaffold352: 126961-127960 Capsella grandiflora
Cagra.0352s0032 1.0kb downstream 1.0kb downstream 4521 true Scaffold352: 127961-132481 Capsella grandiflora
Cagra.0352s0032 1.0kb downstream 1.0kb downstream 1000 false Scaffold352: 131482-132481 Capsella grandiflora
Cagra.0352s0032 2.0kb upstream 2.0kb upstream 5521 true Scaffold352: 125961-131481 Capsella grandiflora
Cagra.0352s0032 2.0kb upstream 2.0kb upstream 2000 false Scaffold352: 125961-127960 Capsella grandiflora
Cagra.0352s0032 2.0kb downstream 2.0kb downstream 5521 true Scaffold352: 127961-133481 Capsella grandiflora
Cagra.0352s0032 2.0kb downstream 2.0kb downstream 2000 false Scaffold352: 131482-133481 Capsella grandiflora
Cagra.0352s0032 5.0kb upstream 5.0kb upstream 8521 true Scaffold352: 122961-131481 Capsella grandiflora
Cagra.0352s0032 5.0kb upstream 5.0kb upstream 5000 false Scaffold352: 122961-127960 Capsella grandiflora
Cagra.0352s0032 5.0kb downstream 5.0kb downstream 8521 true Scaffold352: 127961-136481 Capsella grandiflora
Cagra.0352s0032 5.0kb downstream 5.0kb downstream 5000 false Scaffold352: 131482-136481 Capsella grandiflora
Cagra.0352s0032 10.0kb upstream 10.0kb upstream 13521 true Scaffold352: 117961-131481 Capsella grandiflora
Cagra.0352s0032 10.0kb upstream 10.0kb upstream 10000 false Scaffold352: 117961-127960 Capsella grandiflora
Cagra.0352s0032 10.0kb downstream 10.0kb downstream 13521 true Scaffold352: 127961-141481 Capsella grandiflora
Cagra.0352s0032 10.0kb downstream 10.0kb downstream 10000 false Scaffold352: 131482-141481 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374011 5261 Brassicaceae View MSA
123837829 5264 Brassicales-Malvales View MSA
124342155 5266 SBM View MSA
124242971 5268 Malvidae View MSA
124073300 5270 Rosid View MSA
123751539 5271 Pentapetalae View MSA
122792552 5272 Eudicot View MSA
122051699 5273 Angiosperm View MSA
123429088 5275 Viridiplantae View MSA
121312618 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain