Gene : Cagra.0434s0029 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12135 - DNA REPAIR PROTEIN XP-C / RAD4 Genomic Order:  29
Name:  ? Cagra.0434s0029 Secondary Identifier:  ? PAC:28897350
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0434s0029 0.5kb upstream 0.5kb upstream 4698 true Scaffold434: 100779-105476 Capsella grandiflora
Cagra.0434s0029 0.5kb upstream 0.5kb upstream 500 false Scaffold434: 100779-101278 Capsella grandiflora
Cagra.0434s0029 0.5kb downstream 0.5kb downstream 4698 true Scaffold434: 101279-105976 Capsella grandiflora
Cagra.0434s0029 0.5kb downstream 0.5kb downstream 500 false Scaffold434: 105477-105976 Capsella grandiflora
Cagra.0434s0029 1.0kb upstream 1.0kb upstream 5198 true Scaffold434: 100279-105476 Capsella grandiflora
Cagra.0434s0029 1.0kb upstream 1.0kb upstream 1000 false Scaffold434: 100279-101278 Capsella grandiflora
Cagra.0434s0029 1.0kb downstream 1.0kb downstream 5198 true Scaffold434: 101279-106476 Capsella grandiflora
Cagra.0434s0029 1.0kb downstream 1.0kb downstream 1000 false Scaffold434: 105477-106476 Capsella grandiflora
Cagra.0434s0029 2.0kb upstream 2.0kb upstream 6198 true Scaffold434: 99279-105476 Capsella grandiflora
Cagra.0434s0029 2.0kb upstream 2.0kb upstream 2000 false Scaffold434: 99279-101278 Capsella grandiflora
Cagra.0434s0029 2.0kb downstream 2.0kb downstream 6198 true Scaffold434: 101279-107476 Capsella grandiflora
Cagra.0434s0029 2.0kb downstream 2.0kb downstream 2000 false Scaffold434: 105477-107476 Capsella grandiflora
Cagra.0434s0029 5.0kb upstream 5.0kb upstream 9198 true Scaffold434: 96279-105476 Capsella grandiflora
Cagra.0434s0029 5.0kb upstream 5.0kb upstream 5000 false Scaffold434: 96279-101278 Capsella grandiflora
Cagra.0434s0029 5.0kb downstream 5.0kb downstream 9198 true Scaffold434: 101279-110476 Capsella grandiflora
Cagra.0434s0029 5.0kb downstream 5.0kb downstream 5000 false Scaffold434: 105477-110476 Capsella grandiflora
Cagra.0434s0029 10.0kb upstream 10.0kb upstream 14198 true Scaffold434: 91279-105476 Capsella grandiflora
Cagra.0434s0029 10.0kb upstream 10.0kb upstream 10000 false Scaffold434: 91279-101278 Capsella grandiflora
Cagra.0434s0029 10.0kb downstream 10.0kb downstream 14198 true Scaffold434: 101279-115476 Capsella grandiflora
Cagra.0434s0029 10.0kb downstream 10.0kb downstream 10000 false Scaffold434: 105477-115476 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371964 5261 Brassicaceae View MSA
123832412 5264 Brassicales-Malvales View MSA
124340852 5266 SBM View MSA
124242768 5268 Malvidae View MSA
124051067 5270 Rosid View MSA
123738290 5271 Pentapetalae View MSA
122788160 5272 Eudicot View MSA
122049699 5273 Angiosperm View MSA
121347837 5274 Embryophyte View MSA
123425699 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain