Gene : Cagra.0430s0052 C. grandiflora v1.1
Defline:  (1 of 1) PTHR24362:SF201 - SERINE/THREONINE-PROTEIN KINASE NEK2-RELATED Genomic Order:  52
Name:  ? Cagra.0430s0052 Secondary Identifier:  ? PAC:28917325
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0430s0052 0.5kb upstream 0.5kb upstream 3587 true Scaffold430: 180838-184424 Capsella grandiflora
Cagra.0430s0052 0.5kb upstream 0.5kb upstream 500 false Scaffold430: 183925-184424 Capsella grandiflora
Cagra.0430s0052 0.5kb downstream 0.5kb downstream 3587 true Scaffold430: 180338-183924 Capsella grandiflora
Cagra.0430s0052 0.5kb downstream 0.5kb downstream 500 false Scaffold430: 180338-180837 Capsella grandiflora
Cagra.0430s0052 1.0kb upstream 1.0kb upstream 4087 true Scaffold430: 180838-184924 Capsella grandiflora
Cagra.0430s0052 1.0kb upstream 1.0kb upstream 1000 false Scaffold430: 183925-184924 Capsella grandiflora
Cagra.0430s0052 1.0kb downstream 1.0kb downstream 4087 true Scaffold430: 179838-183924 Capsella grandiflora
Cagra.0430s0052 1.0kb downstream 1.0kb downstream 1000 false Scaffold430: 179838-180837 Capsella grandiflora
Cagra.0430s0052 2.0kb upstream 2.0kb upstream 5087 true Scaffold430: 180838-185924 Capsella grandiflora
Cagra.0430s0052 2.0kb upstream 2.0kb upstream 2000 false Scaffold430: 183925-185924 Capsella grandiflora
Cagra.0430s0052 2.0kb downstream 2.0kb downstream 5087 true Scaffold430: 178838-183924 Capsella grandiflora
Cagra.0430s0052 2.0kb downstream 2.0kb downstream 2000 false Scaffold430: 178838-180837 Capsella grandiflora
Cagra.0430s0052 5.0kb upstream 5.0kb upstream 8087 true Scaffold430: 180838-188924 Capsella grandiflora
Cagra.0430s0052 5.0kb upstream 5.0kb upstream 5000 false Scaffold430: 183925-188924 Capsella grandiflora
Cagra.0430s0052 5.0kb downstream 5.0kb downstream 8087 true Scaffold430: 175838-183924 Capsella grandiflora
Cagra.0430s0052 5.0kb downstream 5.0kb downstream 5000 false Scaffold430: 175838-180837 Capsella grandiflora
Cagra.0430s0052 10.0kb upstream 10.0kb upstream 13087 true Scaffold430: 180838-193924 Capsella grandiflora
Cagra.0430s0052 10.0kb upstream 10.0kb upstream 10000 false Scaffold430: 183925-193924 Capsella grandiflora
Cagra.0430s0052 10.0kb downstream 10.0kb downstream 13087 true Scaffold430: 170838-183924 Capsella grandiflora
Cagra.0430s0052 10.0kb downstream 10.0kb downstream 10000 false Scaffold430: 170838-180837 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365235 5261 Brassicaceae View MSA
123838265 5264 Brassicales-Malvales View MSA
124347853 5266 SBM View MSA
124253005 5268 Malvidae View MSA
124069702 5270 Rosid View MSA
123749307 5271 Pentapetalae View MSA
122794727 5272 Eudicot View MSA
122049152 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351770 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain