Gene : Cagra.0248s0139 C. grandiflora v1.1
Defline:  (1 of 1) PTHR30620:SF40 - BETA-D-XYLOSIDASE 3-RELATED Genomic Order:  139
Name:  ? Cagra.0248s0139 Secondary Identifier:  ? PAC:28918953
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0248s0139 0.5kb upstream 0.5kb upstream 3731 true Scaffold248: 492100-495830 Capsella grandiflora
Cagra.0248s0139 0.5kb upstream 0.5kb upstream 500 false Scaffold248: 495331-495830 Capsella grandiflora
Cagra.0248s0139 0.5kb downstream 0.5kb downstream 3731 true Scaffold248: 491600-495330 Capsella grandiflora
Cagra.0248s0139 0.5kb downstream 0.5kb downstream 500 false Scaffold248: 491600-492099 Capsella grandiflora
Cagra.0248s0139 1.0kb upstream 1.0kb upstream 4231 true Scaffold248: 492100-496330 Capsella grandiflora
Cagra.0248s0139 1.0kb upstream 1.0kb upstream 1000 false Scaffold248: 495331-496330 Capsella grandiflora
Cagra.0248s0139 1.0kb downstream 1.0kb downstream 4231 true Scaffold248: 491100-495330 Capsella grandiflora
Cagra.0248s0139 1.0kb downstream 1.0kb downstream 1000 false Scaffold248: 491100-492099 Capsella grandiflora
Cagra.0248s0139 2.0kb upstream 2.0kb upstream 4899 true Scaffold248: 492100-496998 Capsella grandiflora
Cagra.0248s0139 2.0kb upstream 2.0kb upstream 1668 false Scaffold248: 495331-496998 Capsella grandiflora
Cagra.0248s0139 2.0kb downstream 2.0kb downstream 5231 true Scaffold248: 490100-495330 Capsella grandiflora
Cagra.0248s0139 2.0kb downstream 2.0kb downstream 2000 false Scaffold248: 490100-492099 Capsella grandiflora
Cagra.0248s0139 5.0kb upstream 5.0kb upstream 4899 true Scaffold248: 492100-496998 Capsella grandiflora
Cagra.0248s0139 5.0kb upstream 5.0kb upstream 1668 false Scaffold248: 495331-496998 Capsella grandiflora
Cagra.0248s0139 5.0kb downstream 5.0kb downstream 8231 true Scaffold248: 487100-495330 Capsella grandiflora
Cagra.0248s0139 5.0kb downstream 5.0kb downstream 5000 false Scaffold248: 487100-492099 Capsella grandiflora
Cagra.0248s0139 10.0kb upstream 10.0kb upstream 4899 true Scaffold248: 492100-496998 Capsella grandiflora
Cagra.0248s0139 10.0kb upstream 10.0kb upstream 1668 false Scaffold248: 495331-496998 Capsella grandiflora
Cagra.0248s0139 10.0kb downstream 10.0kb downstream 13231 true Scaffold248: 482100-495330 Capsella grandiflora
Cagra.0248s0139 10.0kb downstream 10.0kb downstream 10000 false Scaffold248: 482100-492099 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378914 5261 Brassicaceae View MSA
123840767 5264 Brassicales-Malvales View MSA
124342835 5266 SBM View MSA
124239504 5268 Malvidae View MSA
124062868 5270 Rosid View MSA
123737560 5271 Pentapetalae View MSA
122787733 5272 Eudicot View MSA
122044178 5273 Angiosperm View MSA
121349595 5274 Embryophyte View MSA
123381370 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain