Gene : Cagra.0086s0044 C. grandiflora v1.1
Defline:  (1 of 3) PTHR24349:SF166 - CALCIUM-DEPENDENT PROTEIN KINASE 11-RELATED Genomic Order:  44
Name:  ? Cagra.0086s0044 Secondary Identifier:  ? PAC:28918422
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0086s0044 0.5kb upstream 0.5kb upstream 2898 true Scaffold86: 171428-174325 Capsella grandiflora
Cagra.0086s0044 0.5kb upstream 0.5kb upstream 500 false Scaffold86: 171428-171927 Capsella grandiflora
Cagra.0086s0044 0.5kb downstream 0.5kb downstream 2898 true Scaffold86: 171928-174825 Capsella grandiflora
Cagra.0086s0044 0.5kb downstream 0.5kb downstream 500 false Scaffold86: 174326-174825 Capsella grandiflora
Cagra.0086s0044 1.0kb upstream 1.0kb upstream 3398 true Scaffold86: 170928-174325 Capsella grandiflora
Cagra.0086s0044 1.0kb upstream 1.0kb upstream 1000 false Scaffold86: 170928-171927 Capsella grandiflora
Cagra.0086s0044 1.0kb downstream 1.0kb downstream 3398 true Scaffold86: 171928-175325 Capsella grandiflora
Cagra.0086s0044 1.0kb downstream 1.0kb downstream 1000 false Scaffold86: 174326-175325 Capsella grandiflora
Cagra.0086s0044 2.0kb upstream 2.0kb upstream 4398 true Scaffold86: 169928-174325 Capsella grandiflora
Cagra.0086s0044 2.0kb upstream 2.0kb upstream 2000 false Scaffold86: 169928-171927 Capsella grandiflora
Cagra.0086s0044 2.0kb downstream 2.0kb downstream 4398 true Scaffold86: 171928-176325 Capsella grandiflora
Cagra.0086s0044 2.0kb downstream 2.0kb downstream 2000 false Scaffold86: 174326-176325 Capsella grandiflora
Cagra.0086s0044 5.0kb upstream 5.0kb upstream 7398 true Scaffold86: 166928-174325 Capsella grandiflora
Cagra.0086s0044 5.0kb upstream 5.0kb upstream 5000 false Scaffold86: 166928-171927 Capsella grandiflora
Cagra.0086s0044 5.0kb downstream 5.0kb downstream 7398 true Scaffold86: 171928-179325 Capsella grandiflora
Cagra.0086s0044 5.0kb downstream 5.0kb downstream 5000 false Scaffold86: 174326-179325 Capsella grandiflora
Cagra.0086s0044 10.0kb upstream 10.0kb upstream 12398 true Scaffold86: 161928-174325 Capsella grandiflora
Cagra.0086s0044 10.0kb upstream 10.0kb upstream 10000 false Scaffold86: 161928-171927 Capsella grandiflora
Cagra.0086s0044 10.0kb downstream 10.0kb downstream 12398 true Scaffold86: 171928-184325 Capsella grandiflora
Cagra.0086s0044 10.0kb downstream 10.0kb downstream 10000 false Scaffold86: 174326-184325 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369493 5261 Brassicaceae View MSA
123841198 5264 Brassicales-Malvales View MSA
124340869 5266 SBM View MSA
124252958 5268 Malvidae View MSA
124069708 5270 Rosid View MSA
123741053 5271 Pentapetalae View MSA
122787584 5272 Eudicot View MSA
122047311 5273 Angiosperm View MSA
121310726 5274 Embryophyte View MSA
123427978 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain